{
  "abstract": null,
  "abstract_shown": false,
  "affiliations": [
    "Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Melbourne, Victoria, Australia",
    "Center for Integrative Spatial-Omics Research, MOE Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence, MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China",
    "Institute of Science and Technology for Brain-Inspired Intelligence, Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Fudan University, Shanghai, China",
    "Monash AI Institute, Monash University, Melbourne, Victoria, Australia",
    "Monash University",
    "Center of Intelligent Medicine, School of Control Science and Engineering, Shandong University, Jinan, China",
    "Institute of Computing Technology",
    "Institute of Computing Technology, Chinese Academy of Sciences, University of Chinese Academy of Sciences, Beijing, China",
    "Shandong University",
    "Kyoto University",
    "Fudan University",
    "The First Affiliated Hospital of Wenzhou Medical University",
    "Hospital of Wenzhou Medical University",
    "Department of Pathology, The First Affiliated Hospital of Wenzhou Medical University, Wenzhou, China",
    "Biomedicine Discovery Institute and Department of Biochemistry and Molecular Biology, Monash University, Melbourne, Victoria, Australia. jiangning.song@monash.edu",
    "Monash AI Institute, Monash University, Melbourne, Victoria, Australia. jiangning.song@monash.edu",
    "Center for Integrative Spatial-Omics Research, MOE Key Laboratory of Computational Neuroscience and Brain-Inspired Intelligence, MOE Frontiers Center for Brain Science, Fudan University, Shanghai, China. zhiyuan@fudan.edu.cn",
    "Institute of Science and Technology for Brain-Inspired Intelligence, Center for Medical Research and Innovation, Shanghai Pudong Hospital, Fudan University Pudong Medical Center, Fudan University, Shanghai, China. zhiyuan@fudan.edu.cn"
  ],
  "article_type": null,
  "arxiv": null,
  "author_total": 13,
  "authors": [
    {
      "affs": [
        0,
        1,
        2,
        3,
        4
      ],
      "name": "Zhikang Wang",
      "orcid": "0000-0001-9587-1965"
    },
    {
      "affs": [
        1,
        5,
        2,
        6
      ],
      "name": "Qi Zou",
      "orcid": "0000-0002-8662-5874"
    },
    {
      "affs": [
        1,
        7,
        2,
        8
      ],
      "name": "Senlin Lin",
      "orcid": "0000-0002-0166-1308"
    },
    {
      "affs": [
        1,
        2,
        9
      ],
      "name": "Sijie Li",
      "orcid": "0009-0005-0521-0722"
    },
    {
      "affs": [
        1,
        2,
        10
      ],
      "name": "Yan Cui"
    },
    {
      "affs": [
        1,
        2,
        11
      ],
      "name": "Daoliang Zhang"
    },
    {
      "affs": [
        1,
        2,
        12
      ],
      "name": "Chuangyi Han",
      "orcid": "0009-0005-8075-261X"
    },
    {
      "affs": [
        0,
        3,
        6
      ],
      "name": "Yida Li",
      "orcid": "0000-0002-4578-3489"
    },
    {
      "affs": [
        13,
        8
      ],
      "name": "Jianmin Li",
      "orcid": "0000-0002-2827-2185"
    },
    {
      "affs": [
        7,
        4
      ],
      "name": "Yi Chen Zhao",
      "orcid": "0000-0001-6046-8420"
    },
    {
      "affs": [
        5,
        10
      ],
      "name": "Rui Gao",
      "orcid": "0000-0002-2074-9997"
    },
    {
      "affs": [
        14,
        15
      ],
      "name": "Jiangning Song",
      "orcid": "0000-0001-8031-9086"
    },
    {
      "affs": [
        16,
        17
      ],
      "name": "Zhiyuan Yuan",
      "orcid": "0000-0002-9367-4236"
    }
  ],
  "bibtex": "https://research.draconitic.com/paper/1qzd0p5r9w3p7.bib",
  "cited_by": 9,
  "doi": "10.1038/s41592-026-03153-3",
  "fulltext_url": null,
  "id": "1qzd0p5r9w3p7",
  "issns": [
    "1548-7091",
    "1548-7105"
  ],
  "landing_url": "https://doi.org/10.1101/2024.12.05.626986",
  "language": "en",
  "licence": "unknown",
  "licence_label": "Licence not stated",
  "licence_source": "unknown",
  "licence_url": null,
  "metadata_licence": null,
  "native_subjects": [
    [
      "openalex",
      "1312|Single-cell and spatial transcriptomics"
    ]
  ],
  "openalex": "W4405178918",
  "pdf_url": null,
  "pmcid": null,
  "pmid": "42426404",
  "published": "2026-07-09",
  "publisher": "Nature Portfolio",
  "ris": "https://research.draconitic.com/paper/1qzd0p5r9w3p7.ris",
  "sources": [
    {
      "first_seen": "2026-10-30T13:26:48Z",
      "native_id": "W4405178918",
      "source": "openalex",
      "url": "https://doi.org/10.1101/2024.12.05.626986"
    }
  ],
  "subjects": [
    {
      "field": "biochemistry",
      "origin": "openalex:1312|Single-cell and spatial transcriptomics",
      "subfield": "molecular-biology"
    }
  ],
  "title": "NicheTrans: spatial-aware cross-omics translation",
  "title_text": "NicheTrans: spatial-aware cross-omics translation",
  "type": "peer-reviewed",
  "updated_at": "2026-11-09T13:21:07Z",
  "url": "https://research.draconitic.com/paper/1qzd0p5r9w3p7",
  "venue": "Nature Methods",
  "versions": []
}