{
  "abstract": "We present a genome assembly from an individual male Acidia cognata (Coltsfoot Fly; Arthropoda; Insecta; Diptera; Tephritidae). The assembly contains two haplotypes with total lengths of 920.12 megabases and 861.67 megabases. Most of the haplotype 1 assembly (99.4%) was scaffolded into seven chromosomal pseudomolecules, including the X and Y sex chromosomes. Haplotype 2 was assembled to scaffold level. The mitochondrial genome has also been assembled, with a length of 18.37 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces genomes for eukaryotic species found in Britain and Ireland.",
  "abstract_shown": true,
  "affiliations": [
    "Wellcome Sanger Institute, Hinxton, Cambridgeshire, England, UK.",
    "University of Oxford, Oxford, Oxfordshire, England, UK."
  ],
  "article_type": "other",
  "arxiv": null,
  "author_total": 9,
  "authors": [
    {
      "affs": [
        0,
        1
      ],
      "name": "James McCulloch"
    },
    {
      "affs": [
        1
      ],
      "name": "Liam M Crowley",
      "orcid": "0000-0001-6380-0329"
    },
    {
      "name": "University of Oxford and Wytham Woods Genome Acquisition Lab"
    },
    {
      "name": "Darwin Tree of Life Barcoding Collective"
    },
    {
      "name": "Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team"
    },
    {
      "name": "Wellcome Sanger Institute Scientific Operations: Sequencing Operations"
    },
    {
      "name": "Wellcome Sanger Institute Tree of Life Core Informatics team"
    },
    {
      "name": "Tree of Life Core Informatics collective"
    },
    {
      "name": "Darwin Tree of Life Consortium"
    }
  ],
  "bibtex": "https://research.draconitic.com/paper/4zn01q5v6hsjz.bib",
  "cited_by": 0,
  "doi": "10.12688/wellcomeopenres.28013.1",
  "fulltext_url": "https://europepmc.org/articles/PMC13722853",
  "id": "4zn01q5v6hsjz",
  "issns": [
    "2398-502X"
  ],
  "landing_url": "https://europepmc.org/article/MED/42968747",
  "language": "eng",
  "licence": "CC-BY",
  "licence_label": "CC BY",
  "licence_source": "article",
  "licence_url": "https://creativecommons.org/licenses/by/4.0/",
  "metadata_licence": null,
  "native_subjects": [
    [
      "heading",
      "Articles"
    ],
    [
      "heading",
      "Genome Note"
    ],
    [
      "openalex",
      "1312|Genomics and Phylogenetic Studies"
    ]
  ],
  "openalex": "W7225129879",
  "pdf_url": "https://europepmc.org/articles/PMC13722853?pdf=render",
  "pmcid": "PMC13722853",
  "pmid": "42968747",
  "published": "2026-10-02",
  "publisher": "The Wellcome Trust",
  "ris": "https://research.draconitic.com/paper/4zn01q5v6hsjz.ris",
  "sources": [
    {
      "first_seen": "2026-11-03T15:20:53Z",
      "native_id": "MED:42968747",
      "source": "europepmc",
      "url": "https://europepmc.org/article/MED/42968747"
    },
    {
      "first_seen": "2026-11-04T12:21:36Z",
      "native_id": "PMC13722853",
      "source": "pmc",
      "url": "https://doi.org/10.12688/wellcomeopenres.28013.1"
    }
  ],
  "subjects": [
    {
      "field": "biochemistry",
      "origin": "openalex:1312|Genomics and Phylogenetic Studies",
      "subfield": "molecular-biology"
    }
  ],
  "title": "The genome sequence of the Coltsfoot Fly, Acidia cognata (Wiedemann, 1817) (Diptera: Tephritidae).",
  "title_text": "The genome sequence of the Coltsfoot Fly, Acidia cognata (Wiedemann, 1817) (Diptera: Tephritidae).",
  "type": "peer-reviewed",
  "updated_at": "2026-11-05T03:20:56Z",
  "url": "https://research.draconitic.com/paper/4zn01q5v6hsjz",
  "venue": "Wellcome open research",
  "versions": []
}