{
  "abstract": "Tropical rain forest is the most diverse terrestrial biome, yet the drivers of its diversification across space and time remain poorly understood. Although heterogeneous diversification rates, including both ancient and recent radiations, have been reported, these dynamics have rarely been examined within a single lineage across deep evolutionary timescales. Here, we reconstruct a dated phylogenomic tree of the pantropical plant family Annonaceae, sampling 2045 species (∼82% of its diversity) and spanning ∼100 million years of evolutionary history. Diversification dynamics vary markedly across tropical regions, correlated with distinct environmental factors rather than uniform processes. Sea level fluctuations dominate in the Asia-Pacific, whereas paleotemperature shapes diversification in the Afrotropics and Neotropics. We also detect a Late Cretaceous increase in diversification, indicating that a substantial portion of Annonaceae diversity originated before the Cretaceous-Paleogene boundary. Together, these results highlight how regional environmental trajectories have shaped the assembly of a diverse tropical plant family over deep evolutionary time.",
  "abstract_shown": true,
  "affiliations": [
    "DIADE, Université de Montpellier, CIRAD, IRD, Montpellier, France.",
    "National Herbarium of New South Wales, Botanic Gardens of Sydney, Mount Annan, Australia.",
    "Naturalis Biodiversity Center, Leiden, Netherlands.",
    "New York Botanical Garden, Bronx, NY, USA.",
    "Centro de Biociências, Departamento de Botânica, Universidade Federal de Pernambuco, Recife, Brazil.",
    "Science Directorate, Royal Botanic Gardens Kew, Richmond, UK.",
    "AMAP, Univ Montpellier, IRD, CIRAD, CNRS, INRAE, Montpellier, France.",
    "AMAP, IRD, Herbier de Nouvelle-Calédonie, Nouméa, New Caledonia.",
    "Department of Biology, Faculty of Science, Mahasarakham University, Maha Sarakham, Thailand.",
    "Herbarium, Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai, Thailand.",
    "Department of Biology, Ghent University, Ghent, Belgium.",
    "Singapore Botanic Gardens, National Parks Board, Singapore, Singapore.",
    "Department of Biological Sciences, National University of Singapore, Singapore, Singapore.",
    "System Earth Science, Faculty of Science and Engineering, Maastricht University, Venlo, Netherlands.",
    "Institut de Systématique, Evolution, Biodiversité (ISYEB), Muséum National d’Histoire Naturelle, CNRS, Sorbonne Université, EPHE, Université des Antilles, Paris, France.",
    "Department of Biological Sciences, Ohio Wesleyan University, Delaware, OH, USA.",
    "Botanical Garden, Universität Hamburg, Hamburg, Germany.",
    "Chair of Botany, TU Dresden, Dresden, Germany.",
    "Division of Biological Science, Faculty of Science, Prince of Songkla University, Hat Yai, Songkhla, Thailand.",
    "Flora Conservation Department, Kadoorie Farm & Botanic Garden, Hong Kong SAR, China.",
    "Instituto de Biologia, Universidade Federal Fluminense, Niterói, Brazil.",
    "Department of Organismic and Evolutionary Biology, Harvard University Herbaria, Cambridge, MA, USA.",
    "Posgrado en Ciencias Biológicas, Instituto de Biología, UNAM, Ciudad de México (CDMX), México.",
    "Departamento de Botánica, Instituto de Biología, UNAM, Ciudad de México (CDMX), México.",
    "Department of Biology, City College of New York, New York, NY, USA.",
    "WasiLab, Pontificia Universidad Católica del Ecuador, Quito, Ecuador.",
    "Departamento de Botánica, Instituto de Biología, Universidad Nacional Autónoma de México, Ciudad Universitaria, Ciudad de México (CDMX), México.",
    "Herbario QCA, Facultad de Ciencias Exactas, Naturales y Ambientales, Pontificia Universidad Católica del Ecuador, Quito, Ecuador.",
    "University Museum, University of Bergen, Bergen, Norway.",
    "Department of Botany, Natural History Museum Vienna, Vienna, Austria.",
    "Mention Biologie et Ecologie Végétales, Faculté des Sciences, Université d’Antananarivo, Antananarivo, Madagascar.",
    "Department of Biology, Higher Teachers' Training College, University of Yaoundé I, Yaoundé, Cameroon.",
    "Africa and Madagascar Department, Missouri Botanical Garden, St. Louis, MO, USA.",
    "Alliance for Conservation Tree Genomics, Kuala Lumpur, Malaysia.",
    "Laboratoire des Sciences du Climat et de l’Environnement, LSCE/IPSL, CEA-CNRS-UVSQ, Université Paris-Saclay, Gif-sur-Yvette, France.",
    "Nanyang Technological University, Singapore, Singapore.",
    "IBED, University of Amsterdam, Amsterdam, Netherlands.",
    "The Pringle Herbarium, Department of Plant Biology, University of Vermont, Burlington, VT, USA.",
    "CNRS, Institut des Sciences de l’Évolution de Montpellier, Université de Montpellier, Montpellier, France."
  ],
  "article_type": null,
  "arxiv": null,
  "author_total": 53,
  "authors": [
    {
      "affs": [
        0
      ],
      "name": "Laura Holzmeyer",
      "orcid": "0000-0001-5789-8673"
    },
    {
      "affs": [
        0,
        1
      ],
      "name": "Francis J. Nge",
      "orcid": "0000-0002-0361-8709"
    },
    {
      "affs": [
        2
      ],
      "name": "Susana Arias Guerrero",
      "orcid": "0009-0007-3657-8399"
    },
    {
      "affs": [
        3
      ],
      "name": "Kate E. Armstrong",
      "orcid": "0000-0001-9850-5717"
    },
    {
      "affs": [
        4
      ],
      "name": "Márcio L. Bazante",
      "orcid": "0000-0003-4485-1926"
    },
    {
      "affs": [
        2
      ],
      "name": "Roxali Bijmoer"
    },
    {
      "affs": [
        5
      ],
      "name": "Renata Borosova",
      "orcid": "0000-0002-3691-5005"
    },
    {
      "affs": [
        6,
        7
      ],
      "name": "David D. Bruy",
      "orcid": "0000-0002-7339-0375"
    },
    {
      "affs": [
        8
      ],
      "name": "Pasakorn Bunchalee",
      "orcid": "0000-0001-8644-3360"
    },
    {
      "affs": [
        9
      ],
      "name": "Tanawat Chaowasku",
      "orcid": "0000-0002-1602-8468"
    },
    {
      "affs": [
        2,
        10
      ],
      "name": "Lars W. Chatrou",
      "orcid": "0000-0003-0131-0302"
    },
    {
      "affs": [
        11,
        12
      ],
      "name": "Junhao Chen",
      "orcid": "0000-0001-8822-169X"
    },
    {
      "affs": [
        0,
        3
      ],
      "name": "Léo-Paul M. J. Dagallier",
      "orcid": "0000-0002-3270-1544"
    },
    {
      "affs": [
        9
      ],
      "name": "Anissara Damthongdee",
      "orcid": "0000-0002-0160-2893"
    },
    {
      "affs": [
        2,
        13
      ],
      "name": "Roy H. J. Erkens",
      "orcid": "0000-0002-1093-0370"
    },
    {
      "affs": [
        10
      ],
      "name": "Federico Fabriani",
      "orcid": "0000-0002-5844-7484"
    },
    {
      "affs": [
        10
      ],
      "name": "Luiz H. M. Fonseca",
      "orcid": "0000-0002-8140-3244"
    },
    {
      "affs": [
        14
      ],
      "name": "Myriam Gaudeul"
    },
    {
      "affs": [
        2
      ],
      "name": "Paul H. Hoekstra",
      "orcid": "0000-0002-2155-0963"
    },
    {
      "affs": [
        15
      ],
      "name": "David M. Johnson",
      "orcid": "0000-0003-2896-7419"
    },
    {
      "affs": [
        16,
        17
      ],
      "name": "Thea Lautenschläger"
    },
    {
      "affs": [
        18
      ],
      "name": "Charan Leeratiwong",
      "orcid": "0000-0002-0752-4275"
    },
    {
      "affs": [
        19
      ],
      "name": "Ming-Fai Liu",
      "orcid": "0000-0002-4732-2512"
    },
    {
      "affs": [
        20
      ],
      "name": "Adriana A. Q. Lobão",
      "orcid": "0000-0003-4036-2367"
    },
    {
      "affs": [
        21
      ],
      "name": "Jenifer C. Lopes",
      "orcid": "0000-0001-6485-9023"
    },
    {
      "affs": [
        0
      ],
      "name": "Cedric Mariac",
      "orcid": "0000-0001-6439-115X"
    },
    {
      "affs": [
        22,
        23
      ],
      "name": "Maria F. Martínez-Velarde",
      "orcid": "0000-0001-9022-9658"
    },
    {
      "affs": [
        24
      ],
      "name": "Kathryn P. Mercier",
      "orcid": "0000-0001-7898-1353"
    },
    {
      "affs": [
        3
      ],
      "name": "Fabian A. Michelangeli",
      "orcid": "0000-0001-7348-143X"
    },
    {
      "affs": [
        25
      ],
      "name": "Rommel Montúfar",
      "orcid": "0000-0001-5309-4889"
    },
    {
      "affs": [
        6
      ],
      "name": "Jérôme J. Munzinger",
      "orcid": "0000-0001-5300-2702"
    },
    {
      "affs": [
        15
      ],
      "name": "Nancy A. Murray",
      "orcid": "0000-0003-4076-6169"
    },
    {
      "affs": [
        26
      ],
      "name": "Andrés E. Ortiz-Rodriguez",
      "orcid": "0000-0003-4583-6701"
    },
    {
      "affs": [
        27
      ],
      "name": "Álvaro J. Pérez",
      "orcid": "0000-0002-0644-9111"
    },
    {
      "affs": [
        28
      ],
      "name": "Michael D. Pirie",
      "orcid": "0000-0003-0403-4470"
    },
    {
      "affs": [
        29
      ],
      "name": "Heimo Rainer",
      "orcid": "0000-0002-5963-349X"
    },
    {
      "affs": [
        30
      ],
      "name": "Mijoro Rakotoarinivo",
      "orcid": "0000-0001-6644-5107"
    },
    {
      "affs": [
        0,
        14
      ],
      "name": "Carlos Rodrigues-Vaz",
      "orcid": "0000-0002-4263-3573"
    },
    {
      "affs": [
        14
      ],
      "name": "Germinal Rouhan",
      "orcid": "0000-0002-0751-5352"
    },
    {
      "affs": [
        1
      ],
      "name": "Hervé Sauquet",
      "orcid": "0000-0001-8305-3236"
    },
    {
      "affs": [
        31
      ],
      "name": "Bonaventure Sonké",
      "orcid": "0000-0002-4310-3603"
    },
    {
      "affs": [
        0
      ],
      "name": "Vincent R. C. Soulé",
      "orcid": "0009-0001-3910-2317"
    },
    {
      "affs": [
        32
      ],
      "name": "Tariq Stévart",
      "orcid": "0000-0002-6212-0361"
    },
    {
      "affs": [
        0
      ],
      "name": "Serafin J. R. Streiff",
      "orcid": "0000-0002-8462-7956"
    },
    {
      "affs": [
        33
      ],
      "name": "Joeri S. Strijk",
      "orcid": "0000-0003-1109-7015"
    },
    {
      "affs": [
        34
      ],
      "name": "Delphine Tardif",
      "orcid": "0000-0001-5118-7600"
    },
    {
      "affs": [
        11,
        35
      ],
      "name": "Daniel C. Thomas",
      "orcid": "0000-0002-1307-6042"
    },
    {
      "affs": [
        0
      ],
      "name": "Archimède Towe Patipe"
    },
    {
      "affs": [
        2,
        36
      ],
      "name": "Jan J. Wieringa",
      "orcid": "0000-0003-0566-372X"
    },
    {
      "affs": [
        37,
        27
      ],
      "name": "J. Nicolás Zapata",
      "orcid": "0000-0002-2863-6524"
    },
    {
      "affs": [
        34
      ],
      "name": "Pierre Sepulchre",
      "orcid": "0000-0002-4267-4025"
    },
    {
      "affs": [
        38
      ],
      "name": "Fabien L. Condamine",
      "orcid": "0000-0003-1673-9910"
    },
    {
      "affs": [
        0,
        2
      ],
      "name": "Thomas L. P. Couvreur",
      "orcid": "0000-0002-8509-6587"
    }
  ],
  "bibtex": "https://research.draconitic.com/paper/cypc3pwcm4hab.bib",
  "cited_by": 0,
  "doi": "10.1126/sciadv.aee4197",
  "fulltext_url": null,
  "id": "cypc3pwcm4hab",
  "issns": [
    "2375-2548"
  ],
  "landing_url": "https://www.science.org/doi/10.1126/sciadv.aee4197",
  "language": "en",
  "licence": "CC-BY-NC-4.0",
  "licence_label": "CC BY-NC 4.0",
  "licence_source": "article",
  "licence_url": "https://creativecommons.org/licenses/by-nc/4.0/",
  "metadata_licence": null,
  "native_subjects": [
    [
      "hal",
      "0.sdv"
    ],
    [
      "hal",
      "1.sdv.ee"
    ],
    [
      "openalex",
      "1105|Plant Diversity and Evolution"
    ]
  ],
  "openalex": "W7214938275",
  "pdf_url": "https://hal.science/hal-05799542/document",
  "pmcid": null,
  "pmid": null,
  "published": "2026-10-02",
  "publisher": "American Association for the Advancement of Science (AAAS)",
  "ris": "https://research.draconitic.com/paper/cypc3pwcm4hab.ris",
  "sources": [
    {
      "first_seen": "2026-10-30T12:17:41Z",
      "native_id": "10.1126/sciadv.aee4197",
      "source": "crossref",
      "url": "https://www.science.org/doi/10.1126/sciadv.aee4197"
    },
    {
      "first_seen": "2026-10-30T12:17:57Z",
      "native_id": "hal-05799542",
      "source": "hal",
      "url": "https://hal.science/hal-05799542v1"
    }
  ],
  "subjects": [
    {
      "field": "biology",
      "origin": "hal:1.sdv.ee",
      "subfield": "ecology"
    }
  ],
  "title": "Macroevolutionary dynamics and predictors of tropical rain forest plant diversity",
  "title_text": "Macroevolutionary dynamics and predictors of tropical rain forest plant diversity",
  "type": "peer-reviewed",
  "updated_at": "2026-10-30T12:17:57Z",
  "url": "https://research.draconitic.com/paper/cypc3pwcm4hab",
  "venue": "Science Advances",
  "versions": []
}