Bioinformatics & computational biology
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- Quantitative Donor Histology and Transcriptomics Link Pancreatic Composition and Precancers Across the Adult Lifespan
- Singular Value Decomposition for the Automated Analysis of NMR Fraction Libraries
- Resonant Recognition Model analysis of cGAS: conserved spectral frequencies and a divergent naked mole-rat phase signature
- Genome-wide loss of chromatin accessibility coexists with selectively elevated RNA abundance in nutrient-starved U2OS cells
- CMVAE: Contrastive Supervision Improves Single-Omic Latent Manifold for Breast Cancer Survival Prognosis
- MaCADEMIA: a software toolbox for single-molecule fluorescence image quantification
- SpaceBlocks: an expert-supervised workflow for cohort-level spatial transcriptomics analysis
- The Almond Expression Atlas: A comprehensive multi-tissue transcriptomic resource for almond gene expression
- Leakage-Controlled Benchmarking of Variant Effect Predictors and Development of Gradient-Boosting Consensus Model
- Physiological Trajectories and Observation Patterns in ICU Mortality Prediction: Transportability Under Changing Measurement Conditions
- A richness-sensitive Acoustic Biodiversity Index from species-level detections: classifier benchmarking, false-positive control and validation against standard soundscape indices in an African savanna and an urban zoo
- A two-stage diffusion-driven morphogenesis model with evolving connectivity
- Co2ODE: Conditionally Coarse-Grained Model Discovery for Rewiring in Biochemical Networks
- Structural identifiability of partially-observed stochastic processes: from single-particle trajectories to total particle density data
- Single-cell perturbation prediction near experimental reproducibility with GENESIS
- Pycea: a scverse toolkit for single-cell lineage tracing analysis
- In silico codon optimization and phylogenetic analysis of various strains of Sapovirus
- Combined Nav1.7-Nav1.8 channel abrogation: Supralinear suppression of excitability in a subpopulation of peripheral sensory neurons.
- Connecting high‐throughput biodiversity inventories: Opportunities for a site‐based genomic framework for global integration and synthesis
- Genomic costs without functional consequences in short-range endemics trapped in evolutionary refugia
- High quality chromosomal genome assemblies of three human Plasmodium species directly from natural infections
- Coupled beta and high-frequency oscillations emerge from synchronized bursting in a minimal model of the parkinsonian subthalamic nucleus
- ATP-independent entropy-driven dsRNA unwinding by DDX3X revealed by coarse-grained simulations and deep learning
- Assessment of LLMs on basic bioinformatics tasks requiring multi-step reasoning and code writing
- Eigenmode decomposition of asymmetries in whole-brain effective connectivity reveals multiscale hierarchical dynamics