Bioinformatics & computational biology
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- IsoGraph resolves coordinated transcript choice and gene abundance in the aging human brain
- LifeLong Digital Twin: A Unified Modeling Paradigm and Agent Harness for Event-Driven Lifelong Health State Trajectories
- A multimodal computer-vision based pipeline for eye-hand coordination quantification during the Nine-Hole Peg Test
- Integrated omics reveals actionable drivers of bioactive variation in US milk
- Reproducibility and Leakage-Controlled Evaluation of Machine-Learning Models for Chronic Kidney Disease Classification
- Surf_2_Volume: A Python Package for Converting CIFTI Cortical Parcellations to NIfTI Volumes
- DeSPA uncovers genes with cross-state spatial pattern remodeling and coordinated spatial programs across multi-slice spatial transcriptomics atlases
- Approximating Parameter Regions for Multistationarity and Multistability in Mass-Action Systems
- SORT disentangles multilevel gene programs across heterogeneous spatial transcriptomic atlases
- AI-Driven Design of Next-Generation Immunoinformatics Multi-Epitope Subunit Vaccine Targeting the Most Virulent Mpox Proteome: A Structural and Kinetic Validation Framework
- Version-aware question answering over living oncology guidelines
- Characterization of artificial riboswitches for Coxsackievirus B3 detection using machine learning
- Anti-target chemical-space coverage of Indian medicinal plant phytochemicals
- Integration of Multi-Omics in AI-Based Models for Predictive Oncology
- Human Intestinal Absorption Revisited: The 1998 Descriptors Survive, and the Method Extends to Permeability
- On the Spread of a Virus and Traveling Waves, Part I
- Cause-excluded Effect Evaluation: a framework for the faithful assessment of genetic perturbation target identification
- Spatiotemporal Heterogeneity of HPV Integration Architectures Drive Oncogenic Features of Oropharyngeal Cancer
- Ab initio CryoEM maps minimizing preferred orientation problems in heterogeneous mixtures: ReconSIREN
- 'broadSeq', a benchmarking tool to contrast differential gene expression methods and identify when genomic neighbourhood matters
- Integrative genetic and transcriptomic analysis identifies candidate genes and compounds for Fragile X syndrome and autism spectrum disorder
- trFlow: ultrafast all-atom protein conformational ensemble generation via conditional flow matching
- OncoNoteBERT: A Foundation Representation Model for Natural Language Processing of Real-World Outpatient Oncology Notes
- On non-monotonic steady state response curves
- Robust Biomolecular Complex Design Across Protein Conformational Landscapes