Skip to content
DraconiticResearch
Search Sources API
197,768 studies31 sourcesUpdated 13 min ago
PreprintCC BY 4.0arXiv

A Differentiable, GPU-Accelerated Finite-Element Formulation in JAX for Large-Deformation Shells with Contact: Application to Patient-Specific Aortic Valve Simulation

Abstract

Patient-specific aortic-valve models can help assess how tissue properties and geometry influence leaflet deformation and coaptation, with potential to inform intervention planning. Large deformations, near-incompressibility, and evolving contact make these simulations computationally demanding and can challenge nonlinear convergence. Differentiable, GPU-accelerated methods offer efficient derivative evaluation and parallel computation, but their matrix-free application to soft-tissue shells with contact remains less established. We developed a forward solver using tatva's energy-based finite-element framework in JAX. The solver combines finite-strain extensible-director shells, hyperelastic constitutive models, and a finite-range repulsive contact energy. Nonlinear equilibrium is solved using a regularized, matrix-free Newton-Krylov method with two-level preconditioning. Automatic differentiation evaluates tangent-vector products without forming or storing the primary tangent matrix, while GPU execution parallelizes element and quadrature-point computations. Constitutive, shell, contact, and self-contact responses were assessed against analytical, semi-analytical, and published benchmarks. At a contact-free plate equilibrium, implicit sensitivities of the converged apex displacement to constitutive parameters, thickness, and pressure agreed with finite differences from independent nonlinear simulations. Simulations of three patient-specific aortic-valve models (two tricuspid and one bicuspid) achieved final relative equilibrium residuals below 10^-4. Median GPU runtimes were approximately 15-25 minutes, with 5.3-6.5-fold speedups relative to corresponding CPU runs on the tested hardware. These results provide component-level verification and demonstrate GPU-accelerated forward valve simulation in the tested cases, supporting future gradient-based inverse studies.

Related

  1. Autoencoder-based anomaly mapping and visualization of white matter deformation with application to glioma cases
    B. Shams, L. Fekonja, P. Vajkoczy +2
    bioRxivPreprintCC BY-NC-NDFull textNeurosciencebioRxiv
  2. TLS-Sim: An Open-Source Toolkit for Individualized Transcranial Light Stimulation Modeling with Deep-Learning-Accelerated Simulation
    K. Zhang, H. Jia, Z. Li +6
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  3. The evaluation of dietary protein levels and the comparative application of the NASEM model for ration formulation in finishing Nellore cattle.
    Kaique de Souza Nascimento, Lorena Emily de Lemos Mota Bomfim, Victor Rezende Moreira Couto +5
    Tropical animal health and productionPeer-reviewedCC BYFull textPlant biologyEurope PMCPMC
  4. Embedding wear assessment in musculoskeletal simulation: A proof-of-concept application to total hip arthroplasty
    A. Di Pietro, L. Mattei, F. Di Puccio
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  5. DiffDose: Differentiable Programming for Personalized Dose-Regimen Optimal Control
    S. Hajhashemi, A. Emad, M. Craig
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv
BibTeX
@misc{nakhaei2026differentiable,
  title = {{A Differentiable, GPU-Accelerated Finite-Element Formulation in JAX for Large-Deformation Shells with Contact: Application to Patient-Specific Aortic Valve Simulation}},
  author = {Mohsen Nakhaei and Alison M. Pouch and Matthew A. Jolley and Wensi Wu},
  howpublished = {arXiv},
  year = {2026},
  month = oct,
  doi = {10.48550/arxiv.2610.38075},
  eprint = {2610.38075},
  archivePrefix = {arXiv},
  url = {https://arxiv.org/abs/2610.38075},
  note = {CC BY 4.0},
}
RIS
TY  - UNPB
TI  - A Differentiable, GPU-Accelerated Finite-Element Formulation in JAX for Large-Deformation Shells with Contact: Application to Patient-Specific Aortic Valve Simulation
AU  - Mohsen Nakhaei
AU  - Alison M. Pouch
AU  - Matthew A. Jolley
AU  - Wensi Wu
PY  - 2026
DA  - 2026/10/27
PB  - arXiv
DO  - 10.48550/arxiv.2610.38075
UR  - https://arxiv.org/abs/2610.38075
AB  - Patient-specific aortic-valve models can help assess how tissue properties and geometry influence leaflet deformation and coaptation, with potential to inform intervention planning. Large deformations, near-incompressibility, and evolving contact make these simulations computationally demanding and can challenge nonlinear convergence. Differentiable, GPU-accelerated methods offer efficient derivative evaluation and parallel computation, but their matrix-free application to soft-tissue shells with contact remains less established. We developed a forward solver using tatva's energy-based finite-element framework in JAX. The solver combines finite-strain extensible-director shells, hyperelastic constitutive models, and a finite-range repulsive contact energy. Nonlinear equilibrium is solved using a regularized, matrix-free Newton-Krylov method with two-level preconditioning. Automatic differentiation evaluates tangent-vector products without forming or storing the primary tangent matrix, while GPU execution parallelizes element and quadrature-point computations. Constitutive, shell, contact, and self-contact responses were assessed against analytical, semi-analytical, and published benchmarks. At a contact-free plate equilibrium, implicit sensitivities of the converged apex displacement to constitutive parameters, thickness, and pressure agreed with finite differences from independent nonlinear simulations. Simulations of three patient-specific aortic-valve models (two tricuspid and one bicuspid) achieved final relative equilibrium residuals below 10^-4. Median GPU runtimes were approximately 15-25 minutes, with 5.3-6.5-fold speedups relative to corresponding CPU runs on the tested hardware. These results provide component-level verification and demonstrate GPU-accelerated forward valve simulation in the tested cases, supporting future gradient-based inverse studies.
SN  - 2331-8422
ER  -