Skip to content
DraconiticResearch
Search Sources API
190,869 studies31 sourcesUpdated 23 min ago
Peer-reviewedCC BY 4.0PLOS One

Phase response curve and RNA-sequencing demonstrate spiders’ sensitivity to light and pinpoint candidate light-responsive genes

  1. 1Department of Biology, Washington and Lee University, Lexington, Virginia, United States of America
  2. 2Department of Biological Sciences, East Tennessee State University, Johnson City, Tennessee, United States of America

Abstract

Spiders can maintain a wide range of free-running periods while still being entrained to a 24-hour day. To investigate the underlying mechanism of this entrainment, we constructed the phase-response curve (PRC) for the orb weaver, Metazygia wittfeldae, by subjecting the spiders to one-hour light pulses at various times throughout the circadian day. The resulting type 0 PRC showed high amplitude (> 6 hour) phase advance and delays when the light pulse was applied during circadian time (CT) 16–18, including a break point of delays to advances. We then investigated the genetic mechanism of response to light by splitting M. wittfeldae adult females entrained to 12 hours light:12 hours dark (LD 12:12) into two groups. One group received a 1-hour light pulse 5 hours after lights off (equivalent to CT17), and the other group did not. We then sacrificed spiders for RNA isolations 1 and 10 hours after the light pulse. We identified numerous genes that were downregulated by the light pulse 1 hour after the pulse relative to no pulse group. Intriguingly, many of these genes had a flipped pattern of expression 9 hours later – the pulse group had higher expression than the no pulse group. We also identified clock gene homologs in M. wittfeldae that had distinct expression patterns from other arthropods.

Related

  1. Cross-species RNA sequencing identifies candidate lateralized genes in teleost brains
    Yuichi Takeuchi, Chika Fujimori, Satoshi Ansai +1
    iSciencePeer-reviewedCC BY 4.0NeuroscienceCrossref
  2. π-MNovo improves de novo peptide sequencing through microbial-domain adaptation and evidence-guided candidate selection
    J. Ye, X. Zhang, B. Sun +9
    bioRxivPreprintAll rights reservedFull textBioinformatics & computational biologybioRxiv
  3. Identification of alcohol use disorder-associated and ethanol-responsive proteins and candidate biomarkers using human cortical organoids
    X. Li, A. J. Boreland, A. Agrawal +11
    bioRxivPreprintCC BY-NC-NDFull textCell biologybioRxiv
  4. Pan-genome analysis of the sunflower LOX gene family: evolution, expression, and salt stress-responsive candidate genes
    Min Song, Lifen He, Yanzun Wang +3
    Frontiers in Plant SciencePeer-reviewedCC BY 4.0Full textPlant biologyCrossrefEurope PMC
  5. Cross-scale genetic, molecular, and cellular triangulation prioritizes ACSL5 as a T3-responsive candidate linking hypothyroidism liability to anemia
    Hui Li, Tao Jiang, Huan Wang +2
    Frontiers in EndocrinologyPeer-reviewedCC BY 4.0Full textGenetics & genomicsCrossrefEurope PMC
BibTeX
@article{toporikova2026phase,
  title = {{Phase response curve and RNA-sequencing demonstrate spiders’ sensitivity to light and pinpoint candidate light-responsive genes}},
  author = {Natalia Toporikova and Wenduo Cheng and Leyuan Qian and Andrew Mah and Thomas Clarke and Thomas C. Jones and Darrell Moore and Nadia A. Ayoub},
  journal = {PLOS One},
  year = {2026},
  month = sep,
  doi = {10.1371/journal.pone.0344063},
  url = {https://doi.org/10.1371/journal.pone.0344063},
  note = {CC BY 4.0},
}
RIS
TY  - JOUR
TI  - Phase response curve and RNA-sequencing demonstrate spiders’ sensitivity to light and pinpoint candidate light-responsive genes
AU  - Natalia Toporikova
AU  - Wenduo Cheng
AU  - Leyuan Qian
AU  - Andrew Mah
AU  - Thomas Clarke
AU  - Thomas C. Jones
AU  - Darrell Moore
AU  - Nadia A. Ayoub
PY  - 2026
DA  - 2026/09/23
JO  - PLOS One
DO  - 10.1371/journal.pone.0344063
UR  - https://doi.org/10.1371/journal.pone.0344063
AB  - Spiders can maintain a wide range of free-running periods while still being entrained to a 24-hour day. To investigate the underlying mechanism of this entrainment, we constructed the phase-response curve (PRC) for the orb weaver, Metazygia wittfeldae, by subjecting the spiders to one-hour light pulses at various times throughout the circadian day. The resulting type 0 PRC showed high amplitude (> 6 hour) phase advance and delays when the light pulse was applied during circadian time (CT) 16–18, including a break point of delays to advances. We then investigated the genetic mechanism of response to light by splitting M. wittfeldae adult females entrained to 12 hours light:12 hours dark (LD 12:12) into two groups. One group received a 1-hour light pulse 5 hours after lights off (equivalent to CT17), and the other group did not. We then sacrificed spiders for RNA isolations 1 and 10 hours after the light pulse. We identified numerous genes that were downregulated by the light pulse 1 hour after the pulse relative to no pulse group. Intriguingly, many of these genes had a flipped pattern of expression 9 hours later – the pulse group had higher expression than the no pulse group. We also identified clock gene homologs in M. wittfeldae that had distinct expression patterns from other arthropods.
SN  - 1932-6203
ER  -