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Peer-reviewedCC BY 4.0Frontiers in Immunology

Metagenomic next-generation sequencing of aqueous humor guides targeted therapy for Staphylococcus epidermidis endophthalmitis in chronic ocular graft-versus-host disease: a case report

  1. 1Third Hospital of Shanxi Medical University, Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital
  2. 2Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Third Hospital of Shanxi Medical University
  3. 3Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology

Abstract

Purpose: To report a case of Staphylococcus epidermidis endophthalmitis in chronic ocular graft-versus-host disease, refractory to empirical broad-spectrum antibiotics, rapidly identified by metagenomic next-generation sequencing of aqueous humor, and successfully managed with targeted vancomycin without vitrectomy.

Methods: Case report.

Results: A 35-year-old male with chronic oGVHD following allo-HSCT for acute myeloid leukemia developed endophthalmitis after 10 months of progressive disease. Slit-lamp examination revealed central corneal ulceration (4 × 2 mm) with hypopyon (1 mm). B-scan ultrasonography confirmed mild vitreous haze. Conventional microbiological workup of aqueous humor—including Gram stain, potassium hydroxide (KOH) mount, and bacterial/fungal culture—yielded negative results. Aqueous humor mNGS detected 5,543 unique reads of S. epidermidis (genome coverage 12.3%, no co-pathogens), exceeding the clinical significance threshold. Based on this result, therapy was switched to targeted intracameral and periocular vancomycin (10 mg/ml) combined with intravenous vancomycin (0.5 g twice daily). Vancomycin was selected for its reliable Gram-positive coverage, including coagulase-negative staphylococci , referencing the established intravitreal dose of 1 mg/0.1 mL. The infection was controlled without corneal perforation or vitrectomy. AMT was performed for persistent epithelial defects. At 1.5 years follow-up, anatomical preservation was maintained (BCVA 20/400 OD; 20/40 OS).

Conclusion: In immunosuppressed oGVHD patients with suspected endophthalmitis, aqueous humor mNGS overcomes the diagnostic limitations of conventional culture and guides a timely switch from empirical antibiotics to targeted therapy, achieving infection control and anatomical preservation without invasive vitrectomy or enucleation.

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BibTeX
@article{wang2026metagenomic,
  title = {{Metagenomic next-generation sequencing of aqueous humor guides targeted therapy for Staphylococcus epidermidis endophthalmitis in chronic ocular graft-versus-host disease: a case report}},
  author = {Jingjing Wang and Junyu Hu and Xing Liang and Fang Yuan and Lijuan Ren and Tao Wang and Zhilin Gao and Yajian Duan},
  journal = {Frontiers in Immunology},
  year = {2026},
  month = oct,
  doi = {10.3389/fimmu.2026.1966692},
  url = {https://www.frontiersin.org/articles/10.3389/fimmu.2026.1966692/full},
  note = {CC BY 4.0},
}
RIS
TY  - JOUR
TI  - Metagenomic next-generation sequencing of aqueous humor guides targeted therapy for Staphylococcus epidermidis endophthalmitis in chronic ocular graft-versus-host disease: a case report
AU  - Jingjing Wang
AU  - Junyu Hu
AU  - Xing Liang
AU  - Fang Yuan
AU  - Lijuan Ren
AU  - Tao Wang
AU  - Zhilin Gao
AU  - Yajian Duan
PY  - 2026
DA  - 2026/10/19
JO  - Frontiers in Immunology
DO  - 10.3389/fimmu.2026.1966692
UR  - https://www.frontiersin.org/articles/10.3389/fimmu.2026.1966692/full
AB  - Purpose: To report a case of Staphylococcus epidermidis endophthalmitis in chronic ocular graft-versus-host disease, refractory to empirical broad-spectrum antibiotics, rapidly identified by metagenomic next-generation sequencing of aqueous humor, and successfully managed with targeted vancomycin without vitrectomy.  Methods: Case report.  Results: A 35-year-old male with chronic oGVHD following allo-HSCT for acute myeloid leukemia developed endophthalmitis after 10 months of progressive disease. Slit-lamp examination revealed central corneal ulceration (4 × 2 mm) with hypopyon (1 mm). B-scan ultrasonography confirmed mild vitreous haze. Conventional microbiological workup of aqueous humor—including Gram stain, potassium hydroxide (KOH) mount, and bacterial/fungal culture—yielded negative results. Aqueous humor mNGS detected 5,543 unique reads of S. epidermidis (genome coverage 12.3%, no co-pathogens), exceeding the clinical significance threshold. Based on this result, therapy was switched to targeted intracameral and periocular vancomycin (10 mg/ml) combined with intravenous vancomycin (0.5 g twice daily). Vancomycin was selected for its reliable Gram-positive coverage, including coagulase-negative staphylococci , referencing the established intravitreal dose of 1 mg/0.1 mL. The infection was controlled without corneal perforation or vitrectomy. AMT was performed for persistent epithelial defects. At 1.5 years follow-up, anatomical preservation was maintained (BCVA 20/400 OD; 20/40 OS).  Conclusion: In immunosuppressed oGVHD patients with suspected endophthalmitis, aqueous humor mNGS overcomes the diagnostic limitations of conventional culture and guides a timely switch from empirical antibiotics to targeted therapy, achieving infection control and anatomical preservation without invasive vitrectomy or enucleation.
SN  - 1664-3224
ER  -