Geometry-induced pulse dynamics in a bulk-surface reaction-diffusion system for cell polarization
Abstract
This paper studies a bulk--surface reaction--diffusion system for cell polarization in two-dimensional domains. The model describes the formation of localized patterns through the wave-pinning mechanism, while explicitly incorporating the effect of cell shape. Using singular perturbation methods, we formally derive reduced ordinary differential equations describing the wave-pinning dynamics on a fast time scale and the subsequent slow drift of pulse solutions induced by domain geometry. The resulting slow dynamics is a gradient flow of a potential function whose geometry-dependent part is expressed in terms of the Neumann Green's function. Moreover, we give a probabilistic interpretation of the potential function using the excursion Poisson kernel. We then analyze the reduced dynamics in several concrete geometries, including dumbbell-shaped domains and perforated disks. In these examples, we characterize stationary pulse positions, their stability, and the bifurcation structures arising from changes in geometric parameters. To evaluate the geometric terms appearing in the reduced dynamics, we use a conformal mapping method to compute the Neumann Green's function for these domains. Our analysis reveals geometry-induced phenomena such as nontrivial stationary pulse locations and both supercritical and subcritical pitchfork bifurcations. Finally, we perform numerical simulations to support the theoretical predictions.
Versions
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BibTeX
@misc{watanabe2026geometryinduced,
title = {{Geometry-induced pulse dynamics in a bulk-surface reaction-diffusion system for cell polarization}},
author = {Riku Watanabe},
howpublished = {arXiv},
year = {2026},
month = aug,
doi = {10.48550/arxiv.2605.10006},
eprint = {2605.10006},
archivePrefix = {arXiv},
url = {https://arxiv.org/abs/2605.10006},
}
RIS
TY - UNPB
TI - Geometry-induced pulse dynamics in a bulk-surface reaction-diffusion system for cell polarization
AU - Riku Watanabe
PY - 2026
DA - 2026/08/13
PB - arXiv
DO - 10.48550/arxiv.2605.10006
UR - https://arxiv.org/abs/2605.10006
AB - This paper studies a bulk--surface reaction--diffusion system for cell polarization in two-dimensional domains. The model describes the formation of localized patterns through the wave-pinning mechanism, while explicitly incorporating the effect of cell shape. Using singular perturbation methods, we formally derive reduced ordinary differential equations describing the wave-pinning dynamics on a fast time scale and the subsequent slow drift of pulse solutions induced by domain geometry. The resulting slow dynamics is a gradient flow of a potential function whose geometry-dependent part is expressed in terms of the Neumann Green's function. Moreover, we give a probabilistic interpretation of the potential function using the excursion Poisson kernel. We then analyze the reduced dynamics in several concrete geometries, including dumbbell-shaped domains and perforated disks. In these examples, we characterize stationary pulse positions, their stability, and the bifurcation structures arising from changes in geometric parameters. To evaluate the geometric terms appearing in the reduced dynamics, we use a conformal mapping method to compute the Neumann Green's function for these domains. Our analysis reveals geometry-induced phenomena such as nontrivial stationary pulse locations and both supercritical and subcritical pitchfork bifurcations. Finally, we perform numerical simulations to support the theoretical predictions.
ER -