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Peer-reviewedCC BYCommunications Medicine

Systematic surveillance of Carbapenemase-producing Enterobacterales reveals persistent spread of IMP-4 IncM2 plasmids in New Caledonia

5 more authors
5 affiliations
  1. 1Medical and Environmental Bacteriology group, Institut Pasteur de Nouvelle-Calédonie
  2. 2Medical Biology Laboratory, Centre Hospitalier Territorial Gaston-Bourret Nouméa
  3. 3INSERM UMR 1184, RESIST Unit, Paris-Saclay University, Faculty of Medicine
  4. 4Institut Pasteur, Université de Paris, Biological Resources Center of Institut Pasteur
  5. 5ISERM, EFS, UMR 1078, GGB, Infection control unit, Centre Hospitalier Universitaire de Brest

Abstract

Background: Carbapenemase-producing Enterobacterales (CPE) have been designated by the World Health Organization as critical global priority pathogens. Their widespread dissemination and nosocomial outbreaks pose a major public health threat. This study examined the transmission patterns and genetic characteristics of CPE isolated in New Caledonia between 2013 and 2022. Methods: A total of 214 CPE isolates were collected, comprising 199 non-duplicate clinical isolates from 164 patients and 15 environmental isolates from hospital surfaces. Isolates were characterized using phenotypic methods and whole-genome sequencing. Results: Among clinical isolates, the most prevalent genera was Enterobacter (n = 68; 34%) and Klebsiella (n = 50; 25%), with 194 isolates (98%) harbouring IMP-type carbapenemases. WGS of 89 selected CPE revealed the predominance of the bla IMP-4 gene (n = 82; 92%). This gene was primarily associated with IncM2-type plasmids carrying a class 1 integron, identified in 65 sequenced isolates. Long-read sequencing resolved these plasmids into seven distinct variants, differentiated by integron structures and a 9305-bp insertion. Genomic, phenotypic, and epidemiological triangulation have identified 12 hospital spread events, with 10 linked to IMP-4 IncM2 plasmids, whose transferability is confirmed by conjugation assays. Conclusion: These results highlighted the pivotal role of plasmid-mediated dissemination in CPE spread and emphasize the urgency of enhanced surveillance to curb silent transmission. The study provided critical insights for targeted infection control strategies in New Caledonia healthcare system, with broader implications for regional antimicrobial resistance containment.

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BibTeX
@article{bourles2026systematic,
  title = {{Systematic surveillance of Carbapenemase-producing Enterobacterales reveals persistent spread of IMP-4 IncM2 plasmids in New Caledonia}},
  author = {Alexandre Bourles and Léo Cousin and Gauthier Delvallez and Antoine Biron and Tiffany Ruge and Rémy A. Bonnin and Laurent Dortet and Sylvain Brisse and Federica Palma and Philippe Saliou and Malia Kainiu and Thibaut Objois and Elena Natiello-Menkes and Matthieu Pot and Frederic Veyrier and Cyrille Goarant and Julien Colot},
  journal = {Communications Medicine},
  year = {2026},
  month = jun,
  doi = {10.1038/s43856-026-01733-0},
  url = {https://doi.org/10.1038/s43856-026-01733-0},
  note = {CC BY},
}
RIS
TY  - JOUR
TI  - Systematic surveillance of Carbapenemase-producing Enterobacterales reveals persistent spread of IMP-4 IncM2 plasmids in New Caledonia
AU  - Alexandre Bourles
AU  - Léo Cousin
AU  - Gauthier Delvallez
AU  - Antoine Biron
AU  - Tiffany Ruge
AU  - Rémy A. Bonnin
AU  - Laurent Dortet
AU  - Sylvain Brisse
AU  - Federica Palma
AU  - Philippe Saliou
AU  - Malia Kainiu
AU  - Thibaut Objois
AU  - Elena Natiello-Menkes
AU  - Matthieu Pot
AU  - Frederic Veyrier
AU  - Cyrille Goarant
AU  - Julien Colot
PY  - 2026
DA  - 2026/06/01
JO  - Communications Medicine
DO  - 10.1038/s43856-026-01733-0
UR  - https://doi.org/10.1038/s43856-026-01733-0
AB  - Background: Carbapenemase-producing Enterobacterales (CPE) have been designated by the World Health Organization as critical global priority pathogens. Their widespread dissemination and nosocomial outbreaks pose a major public health threat. This study examined the transmission patterns and genetic characteristics of CPE isolated in New Caledonia between 2013 and 2022. Methods: A total of 214 CPE isolates were collected, comprising 199 non-duplicate clinical isolates from 164 patients and 15 environmental isolates from hospital surfaces. Isolates were characterized using phenotypic methods and whole-genome sequencing. Results: Among clinical isolates, the most prevalent genera was Enterobacter (n = 68; 34%) and Klebsiella (n = 50; 25%), with 194 isolates (98%) harbouring IMP-type carbapenemases. WGS of 89 selected CPE revealed the predominance of the bla IMP-4 gene (n = 82; 92%). This gene was primarily associated with IncM2-type plasmids carrying a class 1 integron, identified in 65 sequenced isolates. Long-read sequencing resolved these plasmids into seven distinct variants, differentiated by integron structures and a 9305-bp insertion. Genomic, phenotypic, and epidemiological triangulation have identified 12 hospital spread events, with 10 linked to IMP-4 IncM2 plasmids, whose transferability is confirmed by conjugation assays. Conclusion: These results highlighted the pivotal role of plasmid-mediated dissemination in CPE spread and emphasize the urgency of enhanced surveillance to curb silent transmission. The study provided critical insights for targeted infection control strategies in New Caledonia healthcare system, with broader implications for regional antimicrobial resistance containment.
SN  - 2730-664X
ER  -