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PreprintCC BY-NCbioRxiv

MORC and MOM1 spatially constrain RNA Polymerase V chromatin positioning to shape DNA methylation landscapes

  1. 1Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA 90095, USA; Howard Hughes Medical Institute, University of Ca

Abstract

Plant-specific RNA Polymerase V (Pol V) transcribes noncoding RNAs in the RNA-directed DNA methylation pathway, thereby influencing gene expression and genome stability by controlling de novo DNA methylation. However, the mechanisms governing precise chromatin localization and transcriptional activities of Pol V remain elusive. Here we show that Pol V localization is spatially constrained by the chromatin regulators microrchidia (MORC) and MORPHEUS' MOLECULE 1 (MOM1). MORC and MOM1 promote Pol V occupancy at sites near active chromatin, whereas their loss leads to redistribution of Pol V into CMT3-enriched heterochromatin, accompanied by noncoding RNA transcription, small RNA production and DNA methylation. Our findings reveal a combinatorial model in which recruitment, spatial constraint and DNA methylation feedback collectively define Pol V chromatin distribution and epigenetic function.

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BibTeX
@misc{he2026morc,
  title = {{MORC and MOM1 spatially constrain RNA Polymerase V chromatin positioning to shape DNA methylation landscapes}},
  author = {X. He and Z. Li and Y. Xue and J. Guo and X. Liu and S. Feng and Z. Zhong and S. E. Jacobsen},
  howpublished = {bioRxiv},
  year = {2026},
  month = aug,
  doi = {10.64898/2026.08.30.748062},
  url = {https://www.biorxiv.org/content/10.64898/2026.08.30.748062v1},
  note = {CC BY-NC},
}
RIS
TY  - UNPB
TI  - MORC and MOM1 spatially constrain RNA Polymerase V chromatin positioning to shape DNA methylation landscapes
AU  - X. He
AU  - Z. Li
AU  - Y. Xue
AU  - J. Guo
AU  - X. Liu
AU  - S. Feng
AU  - Z. Zhong
AU  - S. E. Jacobsen
PY  - 2026
DA  - 2026/08/30
PB  - bioRxiv
DO  - 10.64898/2026.08.30.748062
UR  - https://www.biorxiv.org/content/10.64898/2026.08.30.748062v1
AB  - Plant-specific RNA Polymerase V (Pol V) transcribes noncoding RNAs in the RNA-directed DNA methylation pathway, thereby influencing gene expression and genome stability by controlling de novo DNA methylation. However, the mechanisms governing precise chromatin localization and transcriptional activities of Pol V remain elusive. Here we show that Pol V localization is spatially constrained by the chromatin regulators microrchidia (MORC) and MORPHEUS' MOLECULE 1 (MOM1). MORC and MOM1 promote Pol V occupancy at sites near active chromatin, whereas their loss leads to redistribution of Pol V into CMT3-enriched heterochromatin, accompanied by noncoding RNA transcription, small RNA production and DNA methylation. Our findings reveal a combinatorial model in which recruitment, spatial constraint and DNA methylation feedback collectively define Pol V chromatin distribution and epigenetic function.
ER  -