Skip to content
DraconiticResearch
Search Sources API
203,203 studies31 sourcesUpdated 45 min ago
PreprintCC BY-NC-NDbioRxiv

ConfUSIus: an accessible and scalable toolkit for functional ultrasound imaging analysis

  • S. Le Meur-Diebolt1
  • F. Cybis Pereira
  1. 1UCL Institute of Ophthalmology, University College London
Read full textPDFDOICite

Abstract

Functional ultrasound imaging (fUSI) maps brainwide hemodynamics at high resolution, yet analysis requires expert knowledge as pipelines remain fragmented across laboratories. We introduce ConfUSIus, an open-source Python package and graphical interface for accessible, scalable, and reproducible fUSI analysis. Its common data model unifies heterogeneous fUSI recordings across beamformed IQ processing, motion correction, registration, denoising, and statistical analysis. ConfUSIus lowers barriers and facilitates method development, comparison, and sharing.

Related

  1. A dependency-free, streamable format and cross-language toolkit for scalable LC-MS feature detection: reading only what you need
    J. Osorio Mosquera, N. G. Lawler, M. Cox +8
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  2. A scalable Zebrafish Platform for genetic validation and functional discovery of stage-specific breast cancer metastasis regulators
    Federica Ruscitto, Chiara Priami, Niccolò Roda +9
    Communications BiologyPeer-reviewedCC BY-NC-ND 4.0Full textCell biologyCrossref
  3. Functional ultrasound imaging in free-moving marmosets reveals that intra-call prosodic features modulate large-scale cortical dynamics
    X. Cheng, Y. Luo, B. Wang +7
    bioRxivPreprintAll rights reservedFull textNeurosciencebioRxiv
  4. Distributed brain-spinal cord dynamics during micturition revealed by functional ultrasound imaging
    H. F. Zareian, S. Sakellaridi, Y. Tung Lo +10
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  5. Agentic transcranial functional ultrasound imaging: @fUS
    Z. CHEN, Z. Yuan, Z. Lu +20
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv

Cite

BibTeXRIS
BibTeX
@misc{meurdiebolt2026confusius,
  title = {{ConfUSIus: an accessible and scalable toolkit for functional ultrasound imaging analysis}},
  author = {S. Le Meur-Diebolt and F. Cybis Pereira},
  howpublished = {bioRxiv},
  year = {2026},
  month = oct,
  doi = {10.64898/2026.10.27.762250},
  url = {https://www.biorxiv.org/content/10.64898/2026.10.27.762250v1},
  note = {CC BY-NC-ND},
}
RIS
TY  - UNPB
TI  - ConfUSIus: an accessible and scalable toolkit for functional ultrasound imaging analysis
AU  - S. Le Meur-Diebolt
AU  - F. Cybis Pereira
PY  - 2026
DA  - 2026/10/27
PB  - bioRxiv
DO  - 10.64898/2026.10.27.762250
UR  - https://www.biorxiv.org/content/10.64898/2026.10.27.762250v1
AB  - Functional ultrasound imaging (fUSI) maps brainwide hemodynamics at high resolution, yet analysis requires expert knowledge as pipelines remain fragmented across laboratories. We introduce ConfUSIus, an open-source Python package and graphical interface for accessible, scalable, and reproducible fUSI analysis. Its common data model unifies heterogeneous fUSI recordings across beamformed IQ processing, motion correction, registration, denoising, and statistical analysis. ConfUSIus lowers barriers and facilitates method development, comparison, and sharing.
ER  -