Skip to content
DraconiticResearch
Search Sources API
189,280 studies31 sourcesUpdated 22 min ago
PreprintCC BYbioRxiv

A Computational Framework for Understanding HCV Infection and Associated Lipid Dynamics

  1. 1Florida Gulf Coast University

Abstract

Hepatitis C virus (HCV) infection is strongly intertwined with host lipid metabolism and is frequently associated with hepatic steatosis, particularly in genotype-specific cases where lipid accumulation reflects direct viral effects rather than host metabolic comorbidities. Despite extensive clinical and experimental evidence, a quantitative framework capturing the bidirectional coupling between viral dynamics and lipid metabolism remains lacking. In this work, we develop a comprehensive mathematical model that integrates HCV infection dynamics with intracellular lipid regulation. The framework combines a reaction diffusion system for spatial viral spread with a coupled metabolic module describing lipid influx. Numerical simulations highlight the role of lipid feedback in shifting infection outcomes toward persistence and recurrent oscillations, demonstrating that lipid accumulation acts as a critical driver of viral amplification. The model also highlights the critical role of immune memory to study acute and chronic phase and successfully reproduces observed viral RNA trajectories. Overall, the framework provides mechanistic insights into HCV dynamics and offers a general modeling approach for studying virus metabolism interactions in liver disease.

Related

  1. Biotic interactions biogeography: A framework for understanding how species interactions shape biodiversity patterns across scales
    Núria Galiana, Miguel B. Araújo
    PLoS BiologyPeer-reviewedCC BYFull text5 citedEcologyOpenAlex
  2. Hemodynamic-Structural Multi-Fidelity Assessment of Endovascular Flow Diversion Strategies for Cerebral Aneurysm Treatment: An Integrated Computational and Experimental Framework
    D. Roy, F. S. Antara, S. A. Moshrur +4
    bioRxivPreprintAll rights reservedFull textNeurosciencebioRxiv
  3. Understanding How Actomyosin Dynamics Drive Apical Constriction by Systematically Tagging and Mapping Actin-Binding Proteins
    P. Zhang, B. N. de Jesus, T. N. Medwig-Kinney +5
    bioRxivPreprintCC BY-NCFull textCell biologybioRxiv
  4. A framework for understanding mast cell activation syndrome from a complex adaptive systems perspective
    Werner Richardt Van Zyl, Sanchen Henning
    Frontiers in Systems BiologyPeer-reviewedCC BYFull textImmunologyDOAJ
  5. A Social Affordance Framework for Understanding Approach Decisions in Wild Crested Macaques ( Macaca nigra )
    Adam Provin, Fannie Beurrier, Muhamad Julfikram Bawimbang +4
    HALPreprintCC BY-NC-ND 4.0Full textGeneral biologyHAL
BibTeX
@misc{jacoby2026computational,
  title = {{A Computational Framework for Understanding HCV Infection and Associated Lipid Dynamics}},
  author = {A. Jacoby and S. Ghosh and M. Banerjee and A. Ghosh and V. Volpert},
  howpublished = {bioRxiv},
  year = {2026},
  month = oct,
  doi = {10.64898/2026.10.16.759547},
  url = {https://www.biorxiv.org/content/10.64898/2026.10.16.759547v1},
  note = {CC BY},
}
RIS
TY  - UNPB
TI  - A Computational Framework for Understanding HCV Infection and Associated Lipid Dynamics
AU  - A. Jacoby
AU  - S. Ghosh
AU  - M. Banerjee
AU  - A. Ghosh
AU  - V. Volpert
PY  - 2026
DA  - 2026/10/16
PB  - bioRxiv
DO  - 10.64898/2026.10.16.759547
UR  - https://www.biorxiv.org/content/10.64898/2026.10.16.759547v1
AB  - Hepatitis C virus (HCV) infection is strongly intertwined with host lipid metabolism and is frequently associated with hepatic steatosis, particularly in genotype-specific cases where lipid accumulation reflects direct viral effects rather than host metabolic comorbidities. Despite extensive clinical and experimental evidence, a quantitative framework capturing the bidirectional coupling between viral dynamics and lipid metabolism remains lacking. In this work, we develop a comprehensive mathematical model that integrates HCV infection dynamics with intracellular lipid regulation. The framework combines a reaction diffusion system for spatial viral spread with a coupled metabolic module describing lipid influx. Numerical simulations highlight the role of lipid feedback in shifting infection outcomes toward persistence and recurrent oscillations, demonstrating that lipid accumulation acts as a critical driver of viral amplification. The model also highlights the critical role of immune memory to study acute and chronic phase and successfully reproduces observed viral RNA trajectories. Overall, the framework provides mechanistic insights into HCV dynamics and offers a general modeling approach for studying virus metabolism interactions in liver disease.
ER  -