Data-driven identification of the ecologically relevant climatic windows and climate summaries with StatClim model
- 1Institute of Botany, Czech Academy of Sciences
Abstract
Climate affects biological processes and organisms. It is extensively recorded, and its effects are frequently studied. Climatic variables are recorded as time series of measurements, but these are often summarized as long-term averages, throwing away biologically relevant information. Subsequent analyses can therefore miss important climate effects or suffer from low predictive power. Here, we propose a new method, StatClim, inferring the most informative climatic summary from the data. Instead of taking a fixed arbitrary summary of a time series, StatClim automatically estimates the beginning and width of a climatic window and simultaneously calculates data aggregation, which best predicts a response variable. We implemented the proposed approach as a Bayesian hierarchical model in Stan. We illustrated the potential of StatClim on published data on mast seeding of Fagus sylvatica. StatClim correctly identified known climatic windows relevant for this tree species, but also uncovered that mast seeding is triggered by high temperatures within these windows. We demonstrated flexibility of the model to account for complex data structures, we ran power analysis showing the ability of the model to identify climatic effects even with modest datasets, and we evaluated its false positive rate, which is lower than 0.01. We discuss the advantages and limitations of StatClim. Compared to existing alternatives, it is suitable for hypothesis testing and offers important advances, such as estimation of the type of aggregation. In combination with existing methods, StatClim will facilitate data-driven use of climatic and microclimatic data and therefore discovering so far unknown climatic effects on biological processes and ecosystem functioning.
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BibTeX
@misc{klimes2026datadriven,
title = {{Data-driven identification of the ecologically relevant climatic windows and climate summaries with StatClim model}},
author = {A. Klimes and M. Macek and J. Wild and J. Bruna and M. Kopecky},
howpublished = {bioRxiv},
year = {2026},
month = oct,
doi = {10.64898/2026.10.07.757008},
url = {https://www.biorxiv.org/content/10.64898/2026.10.07.757008v1},
note = {CC BY},
}
RIS
TY - UNPB
TI - Data-driven identification of the ecologically relevant climatic windows and climate summaries with StatClim model
AU - A. Klimes
AU - M. Macek
AU - J. Wild
AU - J. Bruna
AU - M. Kopecky
PY - 2026
DA - 2026/10/07
PB - bioRxiv
DO - 10.64898/2026.10.07.757008
UR - https://www.biorxiv.org/content/10.64898/2026.10.07.757008v1
AB - Climate affects biological processes and organisms. It is extensively recorded, and its effects are frequently studied. Climatic variables are recorded as time series of measurements, but these are often summarized as long-term averages, throwing away biologically relevant information. Subsequent analyses can therefore miss important climate effects or suffer from low predictive power. Here, we propose a new method, StatClim, inferring the most informative climatic summary from the data. Instead of taking a fixed arbitrary summary of a time series, StatClim automatically estimates the beginning and width of a climatic window and simultaneously calculates data aggregation, which best predicts a response variable. We implemented the proposed approach as a Bayesian hierarchical model in Stan. We illustrated the potential of StatClim on published data on mast seeding of Fagus sylvatica. StatClim correctly identified known climatic windows relevant for this tree species, but also uncovered that mast seeding is triggered by high temperatures within these windows. We demonstrated flexibility of the model to account for complex data structures, we ran power analysis showing the ability of the model to identify climatic effects even with modest datasets, and we evaluated its false positive rate, which is lower than 0.01. We discuss the advantages and limitations of StatClim. Compared to existing alternatives, it is suitable for hypothesis testing and offers important advances, such as estimation of the type of aggregation. In combination with existing methods, StatClim will facilitate data-driven use of climatic and microclimatic data and therefore discovering so far unknown climatic effects on biological processes and ecosystem functioning.
ER -