Genetic legacy in soil seedbanks after grassland conversion to plantation forests: evidence from Potentilla freyniana
- 1Forestry and Forest Products Research Institute, Forest Research and Management Organization
Abstract
Semi-natural grasslands are important ecosystems supporting biodiversity in Japan, but their area has declined rapidly due to land-use change and abandonment of traditional management practices such as mowing and burning. Although the conservation of genetic diversity is essential for the long-term persistence of grassland plants, little is known about the genetic diversity retained in soil seedbanks following conversion of grasslands to plantation forests. In this study, we compared the genetic diversity and population structure of above-ground and soil seedbank populations of the grassland perennial forb Potentilla freyniana across three sites in each of three land-use types: burned grasslands, deciduous plantation forests, and evergreen plantation forests (plantation ages approximately 21-62 years) on the Kaida Plateau, central Japan. Soil seedbank populations were obtained from soil samples through germination experiments, and genetic analyses were conducted using newly developed simple sequence repeat (SSR) markers. Genetic diversity was assessed using expected heterozygosity, allelic richness, and private allelic richness, population structure was evaluated using analysis of molecular variance (AMOVA), STRUCTURE analyses, and pairwise FST. Soil seedbank populations maintained levels of genetic diversity comparable to those of above-ground populations, and no significant differences were detected between the two population types. Furthermore, soil seedbank populations in evergreen plantation forests, where above-ground individuals of P. freyniana were absent, retained genetic diversity comparable to that observed in burned grasslands. AMOVA detected no significant genetic differentiation between above-ground and soil seedbank populations. These results suggest that high levels of genetic diversity can persist in soil seedbank populations for decades after forest establishment and highlight the potential importance of soil seedbanks as genetic resources for grassland restoration.
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BibTeX
@misc{setsuko2026genetic,
title = {{Genetic legacy in soil seedbanks after grassland conversion to plantation forests: evidence from Potentilla freyniana}},
author = {S. Setsuko and K. Uchiyama and T. Koyanagi and K. Uchida and F. Hyodo and F. Fu and A. Koyama},
howpublished = {bioRxiv},
year = {2026},
month = aug,
doi = {10.64898/2026.08.28.747765},
url = {https://www.biorxiv.org/content/10.64898/2026.08.28.747765v1},
note = {CC BY},
}
RIS
TY - UNPB
TI - Genetic legacy in soil seedbanks after grassland conversion to plantation forests: evidence from Potentilla freyniana
AU - S. Setsuko
AU - K. Uchiyama
AU - T. Koyanagi
AU - K. Uchida
AU - F. Hyodo
AU - F. Fu
AU - A. Koyama
PY - 2026
DA - 2026/08/28
PB - bioRxiv
DO - 10.64898/2026.08.28.747765
UR - https://www.biorxiv.org/content/10.64898/2026.08.28.747765v1
AB - Semi-natural grasslands are important ecosystems supporting biodiversity in Japan, but their area has declined rapidly due to land-use change and abandonment of traditional management practices such as mowing and burning. Although the conservation of genetic diversity is essential for the long-term persistence of grassland plants, little is known about the genetic diversity retained in soil seedbanks following conversion of grasslands to plantation forests. In this study, we compared the genetic diversity and population structure of above-ground and soil seedbank populations of the grassland perennial forb Potentilla freyniana across three sites in each of three land-use types: burned grasslands, deciduous plantation forests, and evergreen plantation forests (plantation ages approximately 21-62 years) on the Kaida Plateau, central Japan. Soil seedbank populations were obtained from soil samples through germination experiments, and genetic analyses were conducted using newly developed simple sequence repeat (SSR) markers. Genetic diversity was assessed using expected heterozygosity, allelic richness, and private allelic richness, population structure was evaluated using analysis of molecular variance (AMOVA), STRUCTURE analyses, and pairwise FST. Soil seedbank populations maintained levels of genetic diversity comparable to those of above-ground populations, and no significant differences were detected between the two population types. Furthermore, soil seedbank populations in evergreen plantation forests, where above-ground individuals of P. freyniana were absent, retained genetic diversity comparable to that observed in burned grasslands. AMOVA detected no significant genetic differentiation between above-ground and soil seedbank populations. These results suggest that high levels of genetic diversity can persist in soil seedbank populations for decades after forest establishment and highlight the potential importance of soil seedbanks as genetic resources for grassland restoration.
ER -