Skip to content
DraconiticResearch
Search Sources API
197,785 studies31 sourcesUpdated 18 min ago
Peer-reviewedCC BY-NCChemical and Pharmaceutical Bulletin

Total Synthesis-Assisted Structure Determination and Biological Evaluation of Cytotoxic Cyclodepsipeptide Destruxin F

Abstract

The structure determination of destruxin F was achieved by total synthesis. Four isomers of the α,γ-dihydroxycarboxylic acid derivatives were comprehensively prepared from chiral glycidols in an asymmetric manner, enabling the successful synthesis of all structural candidates of destruxin F. The spectral data of the (1αR,1γR)-isomer were in good agreement with those of natural destruxin F, leading to the determination of the absolute configuration of the undetermined chiral centers as 1αR and 1γR, respectively. Furthermore, biological evaluation of the synthetic compounds revealed that the proper conformation of the cyclic peptide scaffold is required to exhibit the cytotoxicity and that the structure of α-hydroxycarboxylic acid moiety regulates the potency of biological activity.

Related

  1. Rapid Production and Cryo-EM Structure Determination of GPCR-Nanodisc Complexes via Cell-Free Synthesis
    T. A. Guilliam, A. K. Jakimowicz, M. M. Manni +6
    bioRxivPreprintAll rights reservedFull textMolecular biology & gene regulationbioRxiv
  2. Design, Synthesis, and Biological Evaluation of Novel Dithiocarbamate-Based Human Carbonic Anhydrase IX/XII Inhibitors as Potential Anti-Glioblastoma Agents
    Mehlika Dilek Altıntop, Hayrunnisa Nadaroglu, Fatma Yesilyurt +6
    MoleculesPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationCrossrefEurope PMC
  3. Novel Quinoxaline-Based Cyanocarbonimidodithioate Derivatives as Non-Hydroxamate Selective HDAC8 Inhibitors: Design, Synthesis, Biological Evaluation and Mechanistic Studies
    Kosana Sai Chaitanya, Dharani Sen, Markus Schweipert +9
    ChemRxivPreprintCC BYFull textMolecular biology & gene regulationChemRxiv
  4. Structure-Guided Covalent Design and Biological Evaluation of Glycidamido-Leucinamide Antivirulence Agents Against Pseudomonas aeruginosa.
    Xiaoqing Mu, Yujing Huang, Haoming Chen +4
    International journal of molecular sciencesPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMC
  5. RNA engineering approaches to aid high-resolution structure determination of medium- to large-sized RNAs
    Jerricho Tipo, Keerthi Gottipati, Marc C. Morais +1
    Journal of Biological ChemistryPeer-reviewedCC BY 4.0Molecular biology & gene regulationCrossref
BibTeX
@article{shirai2026total,
  title = {{Total Synthesis-Assisted Structure Determination and Biological Evaluation of Cytotoxic Cyclodepsipeptide Destruxin F}},
  author = {Daiki Shirai and Shione Kojima and Hideo Kigoshi and Masahito Yoshida},
  journal = {Chemical and Pharmaceutical Bulletin},
  year = {2026},
  month = sep,
  doi = {10.1248/cpb.c26-00316},
  url = {https://www.jstage.jst.go.jp/article/cpb/74/9/74_c26-00316/_article},
  note = {CC BY-NC},
}
RIS
TY  - JOUR
TI  - Total Synthesis-Assisted Structure Determination and Biological Evaluation of Cytotoxic Cyclodepsipeptide Destruxin F
AU  - Daiki Shirai
AU  - Shione Kojima
AU  - Hideo Kigoshi
AU  - Masahito Yoshida
PY  - 2026
DA  - 2026/09/04
JO  - Chemical and Pharmaceutical Bulletin
DO  - 10.1248/cpb.c26-00316
UR  - https://www.jstage.jst.go.jp/article/cpb/74/9/74_c26-00316/_article
AB  - The structure determination of destruxin F was achieved by total synthesis. Four isomers of the α,γ-dihydroxycarboxylic acid derivatives were comprehensively prepared from chiral glycidols in an asymmetric manner, enabling the successful synthesis of all structural candidates of destruxin F. The spectral data of the (1αR,1γR)-isomer were in good agreement with those of natural destruxin F, leading to the determination of the absolute configuration of the undetermined chiral centers as 1αR and 1γR, respectively. Furthermore, biological evaluation of the synthetic compounds revealed that the proper conformation of the cyclic peptide scaffold is required to exhibit the cytotoxicity and that the structure of α-hydroxycarboxylic acid moiety regulates the potency of biological activity.
SN  - 1347-5223
SN  - 0009-2363
ER  -