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Peer-reviewedCC BY 4.0Communications Biology

ESR1 mutations are associated with enhanced MTORC1 signaling in a context-dependent manner

Abstract

ESR1 mutations are a driver of endocrine therapy resistance in breast cancer, however their impact on protein signaling pathways and clinical outcomes remains poorly understood. We analyzed the transcriptomic, proteomic, and phosphoproteomic landscape of tumors harboring ESR1 mutations. Here we show that ESR1 mutated cancers exhibit a higher mutational burden associated with increased cell proliferation, and display enhanced activation of the mTOR pathway via MTORC1, suggesting an ER-driven amplification of existing oncogenic mechanisms. Analysis of an independent proteomic dataset from breast cancer cell lines further supported a convergence between MTORC1 and ER signaling programs. Integrative multi-omic data analysis incorporating features related to tumor grade, MTORC1 signaling, and ESR1 mutations, enabled the development of a predictive signature that distinguishes patients with ESR1 mutation and identified those at high risk of recurrence. This study provides insights into the mechanisms underlying tumor aggressiveness and poor clinical outcome modulated by ESR1 mutations and highlights the potential of proteogenomic approaches to identify signaling pathways and molecular signatures.

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BibTeX
@article{marchi2026esr1,
  title = {{ESR1 mutations are associated with enhanced MTORC1 signaling in a context-dependent manner}},
  author = {Tommaso De Marchi and Magdalena Kuras and Lazaro Hiram Betancourt and Sven Kjellström and Jeanette Valcich and Johan Vallon-Christersson and Christian Brueffer and Lao H. Saal and Johan Malmström and Emma Niméus},
  journal = {Communications Biology},
  year = {2026},
  month = oct,
  doi = {10.1038/s42003-026-11096-w},
  url = {https://www.nature.com/articles/s42003-026-11096-w},
  note = {CC BY 4.0},
}
RIS
TY  - JOUR
TI  - ESR1 mutations are associated with enhanced MTORC1 signaling in a context-dependent manner
AU  - Tommaso De Marchi
AU  - Magdalena Kuras
AU  - Lazaro Hiram Betancourt
AU  - Sven Kjellström
AU  - Jeanette Valcich
AU  - Johan Vallon-Christersson
AU  - Christian Brueffer
AU  - Lao H. Saal
AU  - Johan Malmström
AU  - Emma Niméus
PY  - 2026
DA  - 2026/10/07
JO  - Communications Biology
DO  - 10.1038/s42003-026-11096-w
UR  - https://www.nature.com/articles/s42003-026-11096-w
AB  - ESR1 mutations are a driver of endocrine therapy resistance in breast cancer, however their impact on protein signaling pathways and clinical outcomes remains poorly understood. We analyzed the transcriptomic, proteomic, and phosphoproteomic landscape of tumors harboring ESR1 mutations. Here we show that ESR1 mutated cancers exhibit a higher mutational burden associated with increased cell proliferation, and display enhanced activation of the mTOR pathway via MTORC1, suggesting an ER-driven amplification of existing oncogenic mechanisms. Analysis of an independent proteomic dataset from breast cancer cell lines further supported a convergence between MTORC1 and ER signaling programs. Integrative multi-omic data analysis incorporating features related to tumor grade, MTORC1 signaling, and ESR1 mutations, enabled the development of a predictive signature that distinguishes patients with ESR1 mutation and identified those at high risk of recurrence. This study provides insights into the mechanisms underlying tumor aggressiveness and poor clinical outcome modulated by ESR1 mutations and highlights the potential of proteogenomic approaches to identify signaling pathways and molecular signatures.
SN  - 2399-3642
ER  -