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Biophysics

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1,034 studies

  1. A Minimal Model of Functional Redundancy as a Route to Enzyme Specialisation
    A. Duygu, H. Moinudeen
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  2. The Dilated Cardiomyopathy E525K Mutation Stabilizes the Cardiac Myosin Interacting-Heads Motif While Activating the Isolated Motor Domain
    R. Gautam, A. K. Somavarapu, K. Z. Robeson +6
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  3. Substrate accessibility of bovine milk proteins to a Pseudomonas metalloprotease reveals why caseins are more readily hydrolysed than whey proteins
    A. Sinha, T. Racca
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  4. Generating Structural Ensembles of Disordered Proteins with Diffusion Models
    O. Trottier, J. H. Gwozdecky, S. Rauscher
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  5. Complex folding kinetics of multi-domain proteins disentangled with periodic forces by magnetic tweezers
    C. A. Quintana-Catano, A. Hartmann, M. Schlierf
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  6. Conformational dynamics of ND2 antiporter-like subunit in intact and truncated complex I
    A. Abettan, J. Lasham, E. Endres +1
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  7. Gag proteolysis drives HIV-1 envelope conformational closure through the gp41 cytoplasmic tail
    S. Padilla-Parra, D. J. Williamson, C. Zaza +11
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  8. Structural basis of selective phospholipid recognition and local membrane deformation by CTL1
    H. Jiang, A. Martinez-Jimenez, K. A. Hossain +10
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  9. Interplay of mechanics, growth and viral infection dynamics in a spatially expanding bacterial colony
    G. Stephenson, A. S. Nadig, T. Parmar +4
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  10. Deep learning–enhanced single-shot triorganelle STED-FLIM imaging of lipid dynamics in living cells
    Lu Gao, Beibei Gao, Wei Ge +5
    Science AdvancesPeer-reviewedCC BYBiophysicsCrossref
  11. A computational super-resolution framework for multidimensional fluorescence imaging
    Wonsang Hwang, Bingying Zhao, Kai Guo +6
    Science AdvancesPeer-reviewedCC BY-NCBiophysicsCrossref
  12. Spins Afar - Long-Range Pulse Dipolar EPR Spectroscopy Uncovers Curvature in TRIM25’s Coiled Coil
    Yannik Limbach, Katrin Ackermann, Aisika Chakraborty +2
    ChemRxivPreprintCC BYFull textBiophysicsChemRxiv
  13. Predicting Collision Cross Sections with GRACE: Geometric Residual Adduct Conditioning via Early-fusion
    Parthasarathy Suryanarayanan, Susanta Das, Shreyans Sethi +2
    arXivPreprintarXiv licenceFull textBiophysicsarXiv
  14. mCranberry: A rationally engineered monomeric red fluorescent protein with 85% quantum yield
    S. Chaubey, S. Mukherjee, A. Adams +5
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  15. Reply to: Structural polymorphism of amyloid fibrils in ATTR amyloidosis revealed by cryo-electron microscopy
    C. Kelly, B. A. Nguyen, V. Singh +7
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  16. CryoSHIELDs: tunable amphipathic peptide additives for cryo-EM
    C. M. Azumaya, P. Dutka, M. C. Johnson +14
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  17. Direct detection of electrogenic polyamine transport
    S. R. Cleary, C. Moreno, S. Srivastava +3
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  18. Mechanical fidelity of brain tissue phantoms: A comparative experimental characterization of equilibrium and dissipative behavior
    E. Baldoin, M. P. Kainz, N. Petrone +3
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  19. Macroscopic Vibronic Coherence and Non-Dispersive Soliton Propagation Across a Protein-Solvent Interface
    K. Woods
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  20. Activation thresholds set the speed of biochemical trigger waves
    Z. Li, J. E. Ferrell
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  21. Mechanophenotype of synovial fibroblasts correlates with patients' pathotypes and treatment response in Rheumatoid Arthritis
    F. Diaz, T. Debatin, L. Messner +9
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  22. Multi-Scale Temporal Flows for Peptide Trajectory Generation
    Xichen Sun, Wentao Wei, Xiaoxi Zhang +2
    arXivPreprintarXiv licenceFull textBiophysicsarXiv
  23. Molecular architecture of TE-seeded chromosome-naive initiation networks of protein-protein interactions delineates the Human Protein Map of the assembly of multiprotein complexes
    Gennadi Glinsky
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  24. Auditable Algebraic Counting Field for Cryptic-Pocket Detection from Apo Structures
    Shan Yu, Xuening Wu
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  25. Improving scoring functions for protein-protein docking with LambdaLoss
    Richard Zhu, Darren Xu, Lee-Shin Chu +1
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv