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Biophysics

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945 studies

  1. Influence of antibody-antigen interaction on fluorescence of Rhodamine 6G conjugated to the antibodies measured in human serum
    D. Thiyagaraj, A. Del Re, Q. D. Pham +3
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  2. Molecular machines measure the nanomechanics of biological membranes
    A. Rottensteiner, M. Paez Perez, S. F. Jones +5
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  3. Particle picking and centering in cryo-electron micrographs via a vanishing radial kernel
    A. Heimowitz, N. SHARON
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  4. Comparative cryo-EM structures of CGMMV and ToMMV reveal divergent coat protein packing and electrostatics indicating Tobamovirus host specificity
    A. Chatterjee, A. Venkatasubramanian, A. A. K. Jailani +7
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  5. Automatic Generation of Novel Highly-Functional Molecular Sequences
    Vincent R. Ragusa, Chrisoph Adami
    arXivPreprintCC BY-NC-ND 4.0Full textBiophysicsarXiv
  6. RangeFinder: Predicting Ligand Property Ranges from Protein Pockets
    Alan Nadelsticher Ruvalcaba, Chris Alvin, Supratik Mukhopadhyay +1
    arXivPreprintarXiv licenceFull textBiophysicsarXiv
  7. Bolek: A Multimodal Language Model for Molecular Reasoning
    Frederic Grabowski, Jacek Szczerbiński, Maciej Jaśkowski +4
    arXivPreprintCC BY-NC-SA 4.0Full text1 citedBiophysicsarXiv
  8. Scalable Contact-Gated Stochastic Operators and Universal Reduction Laws for Macromolecular Protein Dynamics, Allostery, and Kinetics
    M. Singh, G. Singh
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  9. FoxO1 and HNF1α cooperatively remodel nucleosome architecture and mechanical stability to activate transcription
    A. J. Florez Ariza, Z. Yang, R. P. Sosa +5
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  10. Learning inhibitor interactions from protein deep mutational scanning data and deep learning models
    Z. Zou, I. Hazelwood, G. Estevam +5
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  11. Bottom-heaviness stabilizes pelagic fish eggs and generates advective transport at their surface
    M. F. van-Gelder, U. Shavit, D. Givoli +2
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  12. Canonic hemoglobin-oxygen equilibrium: Reassessing the role of cooperativity
    A. E. Allahverdyan, S. G. Gevorkian, A. Harutyunyan +2
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  13. PeptSol: A Translational Benchmark for Protected-Peptide Solubility in Drug Manufacturing
    Alexander Arjun Lobo, Marc Saouda, Urvi Awasthi +1
    arXivPreprintCC BY-NC-ND 4.0Full textBiophysicsarXiv
  14. Application of Fourier transform infrared (FT-IR) spectroscopy to discriminate serotypes of Streptococcus suis
    Francesca Romana Massacci, Miriam Cordovana, Elisa Albini +10
    Veterinary ResearchPeer-reviewedCC BY 4.0Full textBiophysicsHALPMC
  15. Machine-Learned Compact Subspace Generation for Quantum Selected Configuration Interaction within Density Matrix Embedding Framework
    Ashish Kumar Patra, Anurag K. S. V., Ruchika Bhat +3
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  16. End-to-end reconstruction for cryo electron ptychographic single-particle analysis
    S. You, N. Palatkin, S. Shao +1
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  17. Beyond Direct Binding: Serotonin Rewires Model Brain Plasma Membrane-Mediated Communication Pathways in Y4R
    A. Debnath, S. Paul, P. Sharma +1
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  18. Ultra-precision 3D Printed Sample Tubes of Complex Cross Section for Enhanced Electron Paramagnetic Resonance Sensitivity of AqueousSamples
    A. Anilkumar, J. T. Wherley, A. M. Garces +3
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  19. Filament assembly confers the mechanical resilience of the IFI16 restrictosome
    C. M. Stallings, A. Garg, J. Sohn
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  20. Single Molecule Diffusion Studies Reveal Rapid Translations Across Target Membrane Surfaces for both p40Phox PX domain and Class III PI3K VPS34 Complex 1, the Autophagy Lipid Kinase
    L. Lizardos, Y. Ohashi, A. M. McCombs +3
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  21. Inferring scaling laws of branching networks from their geometry by global optimization
    E. Jessen, D. Schillinger, M. C. Steinbach
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  22. Low-pass filtering revisited: ramped phase randomization for cryo-EM map comparison and data augmentation
    L. Y. Dang, W. Jiang
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  23. Kinetic gating by an iron sulfur chain modulates flavin radical-pair spin chemistry in mitochondrial Complex I
    J.-Y. Sung, J.-H. Cheong
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  24. Combined Nav1.7-Nav1.8 channel abrogation: Supralinear suppression of excitability in a subpopulation of peripheral sensory neurons.
    Dmytro Vasylyev, Sidharth Tyagi, Mohammad-Reza Ghovanloo +2
    The Journal of general physiologyPeer-reviewedCC BYFull textBiophysicsEurope PMCPMC
  25. Label- and Slide-Free Multispectral Quantitative Epi-Illumination Deep-Ultraviolet Microscopy
    Mingxuan Si, Viswanath Gorti, Aaron D. Silva Trenkle +5
    BME frontiersPeer-reviewedCC BYFull textBiophysicsEurope PMCPMC