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Biophysics

1,034 studies56 in 7 days372 in 30 days

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1,034 studies

  1. State-selective nanobodies to probe Guanylate-binding protein coat assembly and function
    L. L. Pagani, T. I. Kuhm, C. Pinto +6
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  2. EnsembleEGNN: Set-Based Graph Learning for Thermodynamic Ensembles of Cyclic Peptides
    Aaron L. Feller, Kris Deibler, Maxim Secor
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  3. Computational Insights into Mechanostability and Dissociation Dynamics of the Dengue Virus Envelope Protein Ectodomain Dimer Across pH and Temperature Gradients
    Georcki Ropón-Palacios, Luís G. F. Crespi, Jakub Rydzewski +2
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  4. pH-sensitive binder design with Proton-PottsMPNN
    C. P. Jacobsen, L. Deweid, F. Birnbaum +7
    bioRxivPreprintCC BY-NDFull textBiophysicsbioRxiv
  5. Core NHEJ Factors Maintain Synapsis Across Diverse DNA End Structures
    B. C. Case, I. T. Burger, J. J. Loparo
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  6. SOP-Multi-π: A Two-Site Coarse-Grained Model with Rescaled Aromatic Interactions to Bridge Single-Chain Ensembles and Condensate Phase Behavior of IDPs and Multidomain Proteins
    S. Prajapati, N. Mathur, D. Chakraborty +1
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  7. Structural basis of phosphatidylserine enhancement of Gas6 ligand-induced Axl activation
    N. Fournier, C. Arango, M. Lopez Vasquez +5
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  8. Active Nucleosome Sliding, Eviction, and Reassembly Dynamics Can Regulate Chromatin Condensate Organization
    R. Raj, R. Padinhateeri, P. B. S. Kumar
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  9. Cell Painting Identifies Phenotypic Clusters Associated with Anticancer Drug Responses in OVCAR-3 Ovarian Cancer Cells
    Vladimir E. Popov, Velemir S. Lavrinenko, Ekaterina V. Litau +6
    International Journal of Molecular SciencesPeer-reviewedCC BY 4.0Full textBiophysicsCrossrefEurope PMC
  10. Tailored Watson–Crick Pairing Partners for Xanthosine in RNA
    Stefan Mair, Anna Rázková, Karl Brillet +3
    Chemistry - A European JournalPeer-reviewedCC BY 4.0Full text2 citedBiophysicsStructural biologyHAL
  11. A membrane perspective on peptide-membrane interactions: recent results from solid-state NMR
    Laila Zaatouf, Hugo Legras-Hemonnot, Dror E Warschawski
    Biomedical journalPeer-reviewedCC BY 4.0Full textBiophysicsHAL
  12. Simultaneous CEA and CDH-17 Detection from Cancer Extracellular Vesicles Via Machine Learning Enabled Bio Silent Azide-Infrared Spectroscopy
    Debashish Paul, Natasha Natasha, Sunita Saha +5
    ChemRxivPreprintCC BYFull textBiophysicsChemRxiv
  13. Genetically encoded dinitrobenzyl photostabilizer for enhancing the photostability of fluorescent proteins
    Guihua Li, Xia Wang, Jiben Xue +1
    RSC Chemical BiologyPeer-reviewedCC BY-NC 3.0Full textBiophysicsPMC
  14. bioRheoFlow A Rheometric Platform for In Situ Biofilm Mechanics Under Controlled Flow Conditions
    V. Ianniello, S. Geisel, E. Secchi +2
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  15. Electrode-Tethered DNA: Interfacial Mechanics and Switching Dynamics from Ensemble-Level Atomistic Simulations
    Y. Noh, H. Chang, K. X. Fu
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  16. Metabolic cost sets the shear stress profile of optimal vascular trees
    G. Vazquez-Victorio, E. Hernandez-Lemus, A. Cervera +3
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  17. Polyglutamine aggregation proceeds by stochastic nucleation in the C. elegans nervous system
    Vera van Schijndel, Jorieke Tiggelaar, Myrthe S. E. Franken +6
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxivPMC
  18. Torque-optimized body morphing enables rapid surface to underwater diving in whirligig beetles
    Y. Sun, E. Palmer, L. Xiang +4
    bioRxivPreprintAll rights reservedFull textBiophysicsbioRxiv
  19. A Kiss-and-Ride Mechanism for Lipid Exchange at Membrane Contact Sites
    A. Ballekov, A. Eisenreichov, R. Holic +3
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  20. Plunge freezing tweezers with ultrasonic excitation for reducing preferred particle orientation in cryo-EM
    J. Wenz, M. Flor, C. R. Krueger +2
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  21. Ca2+-tunable mechanics and recoil in reconstituted Tcb2 networks
    Xiangting Lei, K. R. Prathyusha, Carlos Floyd +2
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv
  22. Network analysis of correlated conformational dynamics across the evolution of influenza A virus NS1
    A. Bastiray, J. E. Gonzales, W. Hwang +1
    bioRxivPreprintCC BY-NCFull textBiophysicsbioRxiv
  23. SMartini: automated small molecule parametrization for Martini 3 force field
    D. Yangaliev, S. B. Ozkan
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  24. Sequential Design of Experiments enables accessible and efficient multidimensional mapping of single- and multi-protein condensates
    M. Siketanc, F. Weidner, C. M. Nuesperling +1
    bioRxivPreprintCC BY-NC-NDFull textBiophysicsbioRxiv
  25. LEMON-ZEST: Evolution-Informed Tokenization for Efficient Protein Language Modeling
    Biswajit Banerjee, Claudia Alvarez Carreno, Anton S. Petrov
    arXivPreprintCC BY 4.0Full textBiophysicsarXiv