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Systems & synthetic biology

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1,510 studies

  1. Synergy-informed bilevel optimization reveals joint-specific benefits for realistic exoskeleton torque prediction
    I. Luis, E. M. Gutierrez-Farewik, T. K. Uchida
    bioRxivPreprintCC0Full textSystems & synthetic biologybioRxiv
  2. Cell cycling throttles epithelial--mesenchymal transition
    M. McDermott, A. Dey, R. Mehta +1
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv
  3. A single-cell transcriptomic atlas of the pigtail macaque lung
    T. Kim, J. A. Cornelius, V. Sindhu +22
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  4. Benchmarking foundation models for resting-state functional magnetic resonance imaging time series in cognitive aging research
    Y. M. Liu, M. Ai, K. Zhao +2
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  5. Distinct mechanical signatures of dairy and plant-based cheeses
    A. O. Koosis, E. C. Darwin, V. Ellingsen +1
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  6. Programmable interphyla communication for Staphylococcus aureus by transferability of homoserine lactone sensors between Bacillales bacteria
    B. Sarker, S. N. Rondthaler, M. Zeng +1
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  7. PROST: An Open Toolbox, Harmonised Multi-Lab Dataset, and Meta-Analysis of Ankle-Foot Roll-Over Shape
    C. Reichsbouscher, D. Solav
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  8. Engineered microvessel networks -- Longitudinal transcriptomic profiling validates chip-grown tissues as a robust model for studying vasculature
    L. A. Osorio, B. Hansen, K. Suba +10
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  9. Three-dimensional mapping of human lung fibrosis identifies spatial coupling between tissue microarchitecture and maladaptive repair states
    J. A. Bell, S. K. Robinson, R. Pedley +38
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  10. Coarse-graining genome-scale metabolic models for dynamic, multi-scale simulations of Pseudomonas aeruginosa in gel environments
    M. S. Kim, J. A. Papin, R. M. Ford
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  11. Accelerating reaction network identification via frequency-domain analysis
    Zhou Fang, Wenying Sun, Xiaoyu Zhang +1
    arXivPreprintarXiv licenceFull textSystems & synthetic biologyarXiv
  12. Potential antimicrobial activity, antioxidant, and anti-wrinkle effects of Linum usitatissimum oil nanoemulgel
    Ahmad M. Eid, Mohammed Hawash, Linda Issa +3
    PLOS OnePeer-reviewedCC BY 4.0MicrobiologySystems & synthetic biologyPLOS
  13. Biotribology of meniscus degeneration: correlations between frictional, structural and compressive properties
    Luisa de Roy, Zeynep Kara, Graciosa Quelhas Teixeira +5
    Frontiers in Bioengineering and BiotechnologyPeer-reviewedCC BYFull textSystems & synthetic biologyDOAJ
  14. Drug-induced gastrointestinal toxicity: from pathophysiological mechanisms to human-relevant preclinical models
    Gergő Borka, Gergő Borka, Maurizio Aiello +4
    Frontiers in Bioengineering and BiotechnologyPeer-reviewedCC BYFull textSystems & synthetic biologyDOAJ
  15. Keratinolytic activity of Stenotrophomonas rhizophila and Bacillus spp. as keratin waste biodegradation
    Mohammad Tabatabaei, Zahra Gholizadeh-Farshi, Zahra Rezaei +1
    Molecular Biology Research CommunicationsPeer-reviewedCC BY-NC 4.0Full textSystems & synthetic biologyPMC
  16. Creation of genomic chimeras via megabase scale genome expansion
    C. Sanfiorenzo, R. J. Zhang, G. Wythes +8
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  17. From Fill to Freeze: Redesigning homeRNA to Enable Robust Sampling and Scalable Downstream Processing Workflows for Remote Blood Transcriptomics
    M. Eakman, I. H. Robertson, X. Wei +8
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  18. Commensal Engineered Living Materials for Sustained Secretome Delivery and Wound Healing
    C. O. Lois, E. A. Grice, A. M. Kloxin +1
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  19. stem.MAP: Identification of cell-type-specific protein complexes in mammalian embryonic stem cells.
    A. Rajaraman, S. N. Fischer, M. D. Woodcock-Girard +2
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  20. Preserving Nanotherapy-Induced Allogeneic Murine Islet Graft Tolerance During Distal Methicillin-Resistant Staphylococcus aureus Skin Infection
    E. H. A. Mbaye, D. B. Scariot, X. Zhang +10
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  21. Extensional Flow Microfluidics Reveal Size-Dependent Core-Shell Mechanical Heterogeneity in Pancreatic Tumor Spheroids
    S. Ghanbarpour Mamaghani, T. M. Costa, E. C. Wagner +3
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  22. MitoDecode: quantitative phenotypic decoding of mitochondrial stress states from fluorescence images
    Y. Jia, E. Ward, C. F. Kaminski
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  23. Material context and TGF-β blockade timing determine retained matrix in patient-derived bioprinted keratoconus stroma
    H. Jiang, C. Zhou, F. Gao +5
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  24. Unlocking Targeted Underwater Delivery of Coral Probiotics
    M. P. Facchinelli, M. Contardi, J. Caldwell +16
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  25. Modeling Gene Expression Noise: From Transcriptional Dynamics to Cell Growth and Division
    Augustinas Sukys, Lucy Ham, Kaan Öcal +2
    arXivPreprintCC BY 4.0Full textSystems & synthetic biologyarXiv