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Biology

31,501 studies2,082 in 7 days12,739 in 30 days

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31,501 studies

  1. Rapid, accurate, and memory-frugal sub-gene-level quantification of probe-based, multiplexed single-cell data
    D. He, Y. Gao, R. Patro
    bioRxivPreprintCC BY-NC-NDFull textBioinformatics & computational biologybioRxiv
  2. The enemy of my enemy: A bacterial antagonist rescues Chlamydomonas by inactivating a toxin from a rival
    T. Vuong, C. Schultz, H. R. Suma +6
    bioRxivPreprintAll rights reservedFull textMicrobiologybioRxiv
  3. Integrative identification of Tetratostichococcus sp. CCAH0201 (Trebouxiophyceae, Chlorophyta) from Rhizophora leaves in the Can Gio Mangrove Forest, Vietnam
    T.-L. Nguyen, H.-D. Tran
    bioRxivPreprintCC BYFull textMicrobiologybioRxiv
  4. CauloBrowser 2.0: an AI powered update
    B. Aldikacti, V. A. Lawal, P. Chien +1
    bioRxivPreprintCC BY-NC-NDFull textMicrobiologybioRxiv
  5. Agentic AI enables cell segmentation-free cell-type inference and cell-type-guided cell segmentation in spatial transcriptomics
    Y. Jeong, H. Lee, D. Lee +10
    bioRxivPreprintCC BY-NDFull textBioinformatics & computational biologybioRxiv
  6. Signatures for conserved phenolic-based acclimation responses to UV in a unicellular algal sister of land plants
    C. F. Kunz, D. O. Schopp, I. N. Abreu +6
    bioRxivPreprintCC BYFull textEvolutionary biologybioRxiv
  7. Breaking the bottleneck: semi-automated quantification of actin filament dynamics
    A. D. Nobles, D. M. Rutkowski, C. R. Belden +4
    bioRxivPreprintCC BY-NC-NDFull textCell biologybioRxiv
  8. TGF-b/TIF1g signaling restrains CD8+ T cell expansion while preserving cytotoxic competence
    J. D. Zambrano-Romero, E. Contreras-Castillo, V. Y. Garcia-Rasilla +15
    bioRxivPreprintAll rights reservedFull textImmunologybioRxiv
  9. Curved geometry shapes the observability of hippocampal oscillations
    J. Makarova, R. Munoz-Arnaiz, F. Ashouri +1
    bioRxivPreprintAll rights reservedFull textNeurosciencebioRxiv
  10. A Framework for SPICE MRSI Reconstruction Posterior Uncertainty Quantification
    T. Lyu, S. Jbabdi, S. M. Finney +1
    bioRxivPreprintCC BYFull textNeurosciencebioRxiv
  11. Towards an analytical framework for investigating the neurophysiological influence of social context in speech perception
    E. Y. J. Ip, A. Igoe, B. R. Cowan +1
    bioRxivPreprintCC BYFull textNeurosciencebioRxiv
  12. Cross-excitation in dorsal root ganglia redistributes coding capacity from stimulus intensity to stimulus location
    D. Perevozniuk, N. Koshev, P. Musienko
    bioRxivPreprintCC BYFull textNeurosciencebioRxiv
  13. Residual barcode-like sequences and barcode-associated artifacts after Dorado and Barbell preprocessing of metagenomic reads
    T. Dinse, V. R. Englaender, S. Metz +2
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  14. Predicting Transcriptional Responses to Unseen Compounds through Context Modeling and Multi-View Transfer
    Y. Lei, H. Liang, K. Peng +1
    bioRxivPreprintCC BY-NCFull textBioinformatics & computational biologybioRxiv
  15. Growing a Root from Its Genome : Emergent Tissue Layers and Zones in a GPU-Native Simulation of the Arabidopsis Root Tip
    E. Auger, M. Gandecki, F.-X. Heng
    bioRxivPreprintCC BY-NC-NDFull textBioinformatics & computational biologybioRxiv
  16. Hybrid RY-mers increase aDNA alignment sensitivity
    I. Tolstoganov, K. Sahlin
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  17. Towards a foundation model for raw nanopore signal through discrete tokenization
    G. Cheng, E. Pitkänen
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  18. QRAFT: Scaling coalescent-based species tree inference to one million taxa
    A. Rahman, A. Saha, M. S. Bayzid
    bioRxivPreprintCC BY-NC-NDFull textBioinformatics & computational biologybioRxiv
  19. Theoretical prediction of assembly contiguity
    M. H. Abrar, P. Medvedev, A. Novikov +1
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  20. QUANTA: A quantum annealing framework for species tree estimation using weighted quartet amalgamation
    N. Kumar Mondal, M. S. Bayzid
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  21. scCont: Interpretable Contrastive Learning for Functional Characterization of Cellular State Transitions
    N. Kewalramani, S. Wuchty, M. Crovella +2
    bioRxivPreprintCC BY-NCFull textBioinformatics & computational biologybioRxiv
  22. Genomic characterization and evolutionary path of human satellite 1B in primates highlight a dynamic relationship with transposable elements
    C. Vila-Verde, A. Daponte, D. Eleuterio +3
    bioRxivPreprintCC BY-NC-NDFull textGenetics & genomicsbioRxiv
  23. Genomic and Epigenomic Relationships Capture Different Patterns of Genotype-by-Environment Interaction in Grapevine Clones
    H. Robinson, M. Schmidt, P. Callipo +9
    bioRxivPreprintCC BYFull textGenetics & genomicsbioRxiv
  24. Deep transcriptomic analysis of molecular mediators of complex traits in heterogeneous stock (HS) rats
    D. B. Munro, K.-M. H. Nguyen, C. L. St. Pierre +35
    bioRxivPreprintCC BYFull textGenetics & genomicsbioRxiv
  25. Continental scale genetic diversity supports geo-clustered ecoregions connectivity
    A. C. Riley, M. Hajibabaei
    bioRxivPreprintCC BYFull textEvolutionary biologybioRxiv