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32,057 studies

  1. All-Atom Structure Tokenizer: AtomLM-9b for Biomolecular Structure Prediction
    J. Yan, D. Xie, Z. Wang +2
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  2. Rho: A Purpose-Driven Workspace for Human-AI Collaborative Analysis
    Y. Xia, G. Yu
    bioRxivPreprintCC BY-NC-NDFull textBioinformatics & computational biologybioRxiv
  3. Peptorama: Structure creation and exploratory data analysis for non-ribosomal peptides
    A. C. Sang, C. Paton-Simpson, T. O. Calcott +3
    bioRxivPreprintAll rights reservedFull textBioinformatics & computational biologybioRxiv
  4. A new Serratia taxon found in a trombidiform mite shows genomic evidence of host adaptation but is phylogenetically distinct from Serratia symbiotica
    J. Chang, A. Hoffmann, N. D. Young +3
    bioRxivPreprintAll rights reservedFull textEvolutionary biologybioRxiv
  5. Evolutionary and acclimatory shifts in ion transporter gene expression across salinity transitions in the copepod Eurytemora carolleeae
    T. E. Popp, E. Blondeau-Bidet, A. Fraimout +4
    bioRxivPreprintCC BYFull textEvolutionary biologybioRxiv
  6. SedaDNA metabarcoding reveals hidden histories of within-species sequence variation
    E. Banos, L. Holman, S. Nogue +1
    bioRxivPreprintAll rights reservedFull textEvolutionary biologybioRxiv
  7. Phage-Inducible Chromosomal Jumbo Islands (PICJIs) spreading antimicrobial resistance, host-adaptation factors and defense systems, a novel satellite family of nucleus-forming Chimalliviridae
    A. Rossignol, K. Praud, M. R. Alexandre +8
    bioRxivPreprintAll rights reservedFull textMicrobiologybioRxiv
  8. Functional genomic characterization of anti-phage defense systems in vancomycin-resistant Enterococcus faecium
    E. Evans, L. Tapia, D. Van Tyne
    bioRxivPreprintCC BY-NC-NDFull textMicrobiologybioRxiv
  9. Naturalistic recall preserves temporal specificity despite cortical feature reorganization
    S. Peng, B. Levine, B. R. Buchsbaum
    bioRxivPreprintCC BY-NC-NDFull textNeurosciencebioRxiv
  10. Unilateral naris occlusion with custom-made plugs for reversible olfactory deprivation in juvenile and adult mice
    A. Dorrego-Rivas, S. Peedikayil-Kurien, L. Huang +2
    bioRxivPreprintCC BY-NC-NDFull textNeurosciencebioRxiv
  11. Functional analysis of small-molecule and protein binding domains using monomeric streptavidin-based two-component biosensors
    R. Mutschler, Z. Guo, M. M. Fiorito +2
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  12. Comparative Transcriptomic Analysis of Gene Expression Patterns in Neutrophils from Rheumatoid Arthritis and COVID-19
    S. Nawani, M. Alam
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  13. MicrobeRT: A Framework and Suite of Fine-tuned Language Models for Genomic Sequences
    V. Narayan, B. Merritt, S. Choudhery +5
    bioRxivPreprintCC BY-NCFull textBioinformatics & computational biologybioRxiv
  14. Optimiser Repairs for Living-Cell Self-Driving Laboratories: Performance and Redundancy under Experimental Constraints
    n. Brimo, H. Zhang, D. C. Serdaroglu
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  15. CloneVI: A deep generative model for deciphering the relationships between cell state and mitochondrial genotype
    T. Hibi, Y. Kojima, S. Hayashi +3
    bioRxivPreprintCC BYFull textBioinformatics & computational biologybioRxiv
  16. NORMA 3.0: aesthetic and group-aware visualization and analysis of annotated biological networks
    F. Baltoumas, E. Karatzas, M. Koutrouli +9
    bioRxivPreprintCC BY-NC-NDFull textBioinformatics & computational biologybioRxiv
  17. Rapid Electro-optic Two-photon Bessel Light Sheet Fluorescence Lifetime Imaging for Tissue Volume Interrogation
    P. Kumar, V. R. Knight, D. E. Lysko +6
    bioRxivPreprintCC BY-NDFull textSystems & synthetic biologybioRxiv
  18. A Distinct Mode of Chromosome-End Genome Instability Revealed by Circulome Characterization and Analyses
    G. Roy, Z. Lei, M. McCoy +7
    bioRxivPreprintAll rights reservedFull textGenetics & genomicsbioRxiv
  19. Deep Recovery of Effective Migration Surfaces
    J. Liang, G. Bradburd, J. Terhorst
    bioRxivPreprintCC BYFull textGenetics & genomicsbioRxiv
  20. Phenotypic plasticity segregates antagonistic species but undermines their coexistence
    D. E. Shaji, M. Hadi, Y. Chavhan
    bioRxivPreprintAll rights reservedFull textEvolutionary biologybioRxiv
  21. The YjfJ protein is the effector of a second PspA/VIPP1 system that is widespread in the Gammaproteobacteria
    D. R. Game, H. C. Livesy, M. W. Van der Woude +1
    bioRxivPreprintCC BYFull textMicrobiologybioRxiv
  22. Lung Epithelial TLR7 is a Factor in Viral Replication and Pathogenesis
    M. J. Granoski, R. D. McClelland, L. M. Bilawchuk +12
    bioRxivPreprintAll rights reservedFull textMicrobiologybioRxiv
  23. Sarrella massiliensis gen. nov. sp. nov., a new gut genus isolated from the stool of a healthy donor
    R. Semmar, M. Beye, N. Orain +7
    bioRxivPreprintCC BYFull textMicrobiologybioRxiv
  24. High-fat diet promotes exhaustion-associated T-cell remodeling across vascular and lymphoid tissues in atherosclerosis-prone mice
    P. Yarahmadi, Y. Xie, D. T. N. Huynh +4
    bioRxivPreprintAll rights reservedFull textImmunologybioRxiv
  25. Intestinal molecular siphoning by engineered bacterial spores for non-systemic treatment of nicotine addiction
    X. Xiong, R. Zhu, Y. Han +4
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv