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Medicinal chemistry & drug discovery

161 studies18 in 7 days47 in 30 days

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161 studies

  1. Mol-JEPA: A multimodal Joint Embedding Predictive Architecture for Molecules
    Florian Rottach, Sebastian Schieferdecker, William Rudman +2
    arXiv (Cornell University)PreprintCC BYFull text5 citedMedicinal chemistry & drug discoveryOpenAlex
  2. A protein–foldamer supramolecular synthon for self-assembled hybrid architectures
    Johannes Sigl, Vasily Morozov, Lingfei Wang +14
    Nature Chemistry-Peer-reviewedPublisher termsFull text2 citedMedicinal chemistry & drug discoveryHAL
  3. Robust out-of-distribution prediction of Buchwald–Hartwig reactions
    Paulo Neves, Bo Hao, Santeri Aikonen +4
    Nature Computational SciencePeer-reviewedCC BYFull text5 citedMedicinal chemistry & drug discoveryOpenAlex
  4. Foreword
    Kenichiro Todoroki
    Chemical and Pharmaceutical BulletinPeer-reviewedCC BY-NCFull textMedicinal chemistry & drug discoveryJ-STAGE
  5. Integrating Artificial Intelligence Into Drug Discovery From Medicinal Plants: Current Applications and Infrastructural Challenges
    Amit Gangwal, Azim Ansari, Mohd Usman Mohd Siddique +3
    Chemical Biology & Drug DesignPeer-reviewedCC BY6 citedMedicinal chemistry & drug discoveryOpenAlex
  6. Transformers for molecular property prediction: domain adaptation efficiently improves performance
    Afnan Sultan, Max Rausch-Dupont, Shahrukh Rafi Khan +3
    Journal of CheminformaticsPeer-reviewedCC BY13 citedMedicinal chemistry & drug discoveryOpenAlex
  7. Reliability of AI Methods in Drug Discovery: Evaluation of Boltz-2 for Structure and Binding Affinity Prediction
    Shunzhou Wan, Xibei Zhang, Xue Xiao +1
    Journal of Chemical Theory and ComputationPeer-reviewedCC BYFull text20 citedMedicinal chemistry & drug discoveryOpenAlex
  8. Autonomous bioisosteric replacement for multi-property optimization in drug design
    Hyeongwoo Kim, Seokhyun Moon, Wonho Zhung +3
    Nature CommunicationsPeer-reviewedCC BYFull text5 citedMedicinal chemistry & drug discoveryOpenAlex
  9. UniPert-G2CP bridges genetic and chemical screens from molecular representation to phenotype modeling
    Yiming Li, Min De ZENG, Jun Zhu +6
    CellPeer-reviewedCC BY9 citedMedicinal chemistry & drug discoveryOpenAlex
  10. An Experimentally Validated Structure-Based Virtual Screening Approach to Identify Nucleotide-Binding Protein Inhibitors as a New Source of Kinase Inhibitors
    Nicolas Bosc, Fabrice Carles, Jade Fogha +8
    PharmaceuticalsPeer-reviewedCC BY 4.0Full textMedicinal chemistry & drug discoveryOrganic chemistryHAL
  11. A comprehensive review of small molecule drugs approved by the FDA in 2025: advance and prospect
    Yi‐Ru Bai, Ruifang Li, Xinhui Zhang +4
    Journal of Enzyme Inhibition and Medicinal ChemistryPeer-reviewedCC BY-NC5 citedMedicinal chemistry & drug discoveryOpenAlex
  12. Flow matching for reaction pathway generation
    Ping Tuo, Jiale Chen, Ju Li
    Nature CommunicationsPeer-reviewedCC BYFull text12 citedMedicinal chemistry & drug discoveryOpenAlex
  13. Water Sorption Behavior and Humidity-Control Ability of Calcined Sugarcane Bagasse–Derived Porous Carbon for Biomass Valorization
    Kaito Yamashiro, Shori Tsubakimoto, Fumihiko Ogata +1
    Chemical and Pharmaceutical BulletinPeer-reviewedCC BY-NCFull textMedicinal chemistry & drug discoveryJ-STAGE
  14. RetroAgent: Harnessing LLMs to Search Over Structured Memory for Agentic Retrosynthesis Planning
    Yanqiao Zhu, Jingru Gan, Xiaoqi Sun +8
    arXiv (Cornell University)PreprintLicence not statedFull text5 citedMedicinal chemistry & drug discoveryOpenAlex
  15. PeptiVerse: A unified platform for therapeutic peptide property prediction
    Yinuo Zhang, Sophia Tang, Tong Chen +3
    Nature CommunicationsPeer-reviewedCC BY-NC-NDFull text9 citedMedicinal chemistry & drug discoveryOpenAlex
  16. A machine learning benchmarking framework for lipid nanoparticle transfection efficiency prediction
    Asal Mehradfar, Mohammad Shahab Sepehri, José Miguel Hernández-Lobato +4
    Communications AI & ComputingPeer-reviewedCC BY-NC-NDFull text9 citedMedicinal chemistry & drug discoveryOpenAlex
  17. Advancing In Silico Drug Design with Bayesian Refinement of AlphaFold Models
    Samiran Sen, Samuel Hoff, Tatiana I. Morozova +2
    Journal of Chemical Theory and ComputationPeer-reviewedLicence not statedFull text6 citedMedicinal chemistry & drug discoveryOpenAlex
  18. Scaling SMILES-Based Chemical Language Models for Therapeutic Peptide Engineering
    Aaron L. Feller, Maxim Secor, Sebastian Swanson +2
    Journal of Chemical Information and ModelingPeer-reviewedLicence not statedFull text9 citedMedicinal chemistry & drug discoveryOpenAlex
  19. Navigating chemical-linguistic sharing space with heterogeneous molecular encoding
    Liuzhenghao Lv, Hao Li, Yu Wang +6
    Nature CommunicationsPeer-reviewedCC BY-NC-NDFull text8 citedMedicinal chemistry & drug discoveryOpenAlex
  20. MolMiner: Toward Controllable, Three‐Dimensional‐Aware, Fragment‐Based Molecular Design
    Raul Ortega Ochoa, Tejs Vegge, Jes Frellsen
    Advanced Intelligent DiscoveryPeer-reviewedCC BY6 citedMedicinal chemistry & drug discoveryOpenAlex
  21. FLOWR.ROOT – A flow matching-based foundation model for joint multi-purpose structure-aware 3D ligand generation and affinity prediction
    Julian Cremer, Tuan Le, Mohammad Mehdi Ghahremanpour +3
    Nature CommunicationsPeer-reviewedCC BYFull text9 citedMedicinal chemistry & drug discoveryOpenAlex
  22. V-SYNTHES2—the next generation tool for structure-based virtual screening of giga-scale chemical spaces
    Antonina L. Nazarova, Anastasiia Sadybekov, Arman A. Sadybekov +5
    npj Drug Discovery.Peer-reviewedCC BY-NC-NDFull text8 citedMedicinal chemistry & drug discoveryOpenAlex
  23. Identifying and Addressing Systematic Data Leakage in Protein-Ligand Affinity Benchmarks
    Björn Mattsson, W. Patrick Walters
    bioRxiv (Cold Spring Harbor Laboratory)PreprintCC BY7 citedMedicinal chemistry & drug discoveryOpenAlex
  24. Count your bits: fingerprint benchmarking to assess broad chemical space representation
    Florian Huber, Julian Pollmann
    Journal of CheminformaticsPeer-reviewedCC BYFull text8 citedMedicinal chemistry & drug discoveryOpenAlex
  25. Artificial Intelligence in drug discovery and development: current landscape, challenges, and future perspectives
    Attila A. Seyhan, Claudio Carini
    Critical Reviews in Oncology/HematologyPeer-reviewedCC BY-NC-ND6 citedMedicinal chemistry & drug discoveryOpenAlex