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Peer-reviewedCC BYMolecular Biology and Evolution

Emergence and stabilization of a neo-Y chromosome in nematode species with rare males

Abstract

How do sex chromosomes evolve in the transition to asexuality? So far, species that depart from canonical sexual reproduction-for example, parthenogens with rare sex or species where the paternal genome is set aside-have been found to carry either no sex chromosomes or sex chromosomes but no male-specific sex chromosome (i.e. no Y). Here we reveal that, in Mesorhabditis nematodes, a new Y chromosome evolved once, from sexual ancestors, in species that have transitioned into an unconventional mode of reproduction called autopseudogamy. In this reproductive system, females produce clonal females plus rare (∼10%) males that are needed for fertilization but that do not contribute to the female genome. Analyzing the Y chromosomes of two autopseudogamous species, we found high levels of degeneration, most likely due to loss of recombination, and two additional conserved features: (i) they accumulated male-beneficial genes, and (ii) they display a strong fertilization drive, in that mainly Y-bearing sperm fertilize female oocytes. Both features are likely evolutionarily favorable in the context of autopseudogamy. Our results suggest that male-specific chromosomes can still be maintained in systems with rare, and possibly "genetically useless," males.

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BibTeX
@article{letcher2026emergence,
  title = {{Emergence and stabilization of a neo-Y chromosome in nematode species with rare males}},
  author = {Brice Letcher and Lewis Stevens and Nathanaëlle Saclier and Andrew Hsiao and Manuela Kieninger and Eva Wenger and Caroline Launay and Mark Blaxter and Marie Delattre},
  journal = {Molecular Biology and Evolution},
  year = {2026},
  month = aug,
  doi = {10.1093/molbev/msag177},
  url = {https://hal.science/hal-05848535v1},
  note = {CC BY},
}
RIS
TY  - JOUR
TI  - Emergence and stabilization of a neo-Y chromosome in nematode species with rare males
AU  - Brice Letcher
AU  - Lewis Stevens
AU  - Nathanaëlle Saclier
AU  - Andrew Hsiao
AU  - Manuela Kieninger
AU  - Eva Wenger
AU  - Caroline Launay
AU  - Mark Blaxter
AU  - Marie Delattre
PY  - 2026
DA  - 2026/08/01
JO  - Molecular Biology and Evolution
DO  - 10.1093/molbev/msag177
UR  - https://hal.science/hal-05848535v1
AB  - How do sex chromosomes evolve in the transition to asexuality? So far, species that depart from canonical sexual reproduction-for example, parthenogens with rare sex or species where the paternal genome is set aside-have been found to carry either no sex chromosomes or sex chromosomes but no male-specific sex chromosome (i.e. no Y). Here we reveal that, in Mesorhabditis nematodes, a new Y chromosome evolved once, from sexual ancestors, in species that have transitioned into an unconventional mode of reproduction called autopseudogamy. In this reproductive system, females produce clonal females plus rare (∼10%) males that are needed for fertilization but that do not contribute to the female genome. Analyzing the Y chromosomes of two autopseudogamous species, we found high levels of degeneration, most likely due to loss of recombination, and two additional conserved features: (i) they accumulated male-beneficial genes, and (ii) they display a strong fertilization drive, in that mainly Y-bearing sperm fertilize female oocytes. Both features are likely evolutionarily favorable in the context of autopseudogamy. Our results suggest that male-specific chromosomes can still be maintained in systems with rare, and possibly "genetically useless," males.
SN  - 0737-4038
SN  - 1537-1719
ER  -