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Peer-reviewedCC BYWellcome open research

The genome sequence of Alnus cordata (Loisel. Duby, 1828) (Fagales: Betulaceae).

  • Markus Ruhsam1
  • Peter M Hollingsworth1
  • Royal Botanic Garden Edinburgh Genome Acquisition Lab
  • Plant Genome Sizing Collective
  • Darwin Tree of Life Barcoding collective
  • Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team
  • Wellcome Sanger Institute Scientific Operations: Sequencing Operations
  • Wellcome Sanger Institute Tree of Life Core Informatics team
  • Tree of Life Core Informatics collective
  • Darwin Tree of Life Consortium
  1. 1Royal Botanic Garden Edinburgh, Edinburgh, Scotland, UK.
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Abstract

We present a genome assembly of Alnus cordata (Italian Alder; Streptophyta; Magnoliopsida; Fagales; Betulaceae). The assembly consists of two haplotypes with total lengths of 468.52 megabases and 468.51 megabases. Most of haplotype 1 (98.99%) is scaffolded into 14 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequences have lengths of 521.58 and 155.53 kilobases and the plastid genome assembly has a length of 160.76 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

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Cite

BibTeXRIS
BibTeX
@article{ruhsam2026genome,
  title = {{The genome sequence of Alnus cordata (Loisel. Duby, 1828) (Fagales: Betulaceae).}},
  author = {Markus Ruhsam and Peter M Hollingsworth and Royal Botanic Garden Edinburgh Genome Acquisition Lab and Plant Genome Sizing Collective and Darwin Tree of Life Barcoding collective and Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team and Wellcome Sanger Institute Scientific Operations: Sequencing Operations and Wellcome Sanger Institute Tree of Life Core Informatics team and Tree of Life Core Informatics collective and Darwin Tree of Life Consortium},
  journal = {Wellcome open research},
  year = {2026},
  month = sep,
  doi = {10.12688/wellcomeopenres.27529.1},
  url = {https://europepmc.org/article/MED/42922480},
  note = {CC BY},
}
RIS
TY  - JOUR
TI  - The genome sequence of Alnus cordata (Loisel. Duby, 1828) (Fagales: Betulaceae).
AU  - Markus Ruhsam
AU  - Peter M Hollingsworth
AU  - Royal Botanic Garden Edinburgh Genome Acquisition Lab
AU  - Plant Genome Sizing Collective
AU  - Darwin Tree of Life Barcoding collective
AU  - Wellcome Sanger Institute Tree of Life Management, Samples and Laboratory team
AU  - Wellcome Sanger Institute Scientific Operations: Sequencing Operations
AU  - Wellcome Sanger Institute Tree of Life Core Informatics team
AU  - Tree of Life Core Informatics collective
AU  - Darwin Tree of Life Consortium
PY  - 2026
DA  - 2026/09/16
JO  - Wellcome open research
DO  - 10.12688/wellcomeopenres.27529.1
UR  - https://europepmc.org/article/MED/42922480
AB  - We present a genome assembly of Alnus cordata (Italian Alder; Streptophyta; Magnoliopsida; Fagales; Betulaceae). The assembly consists of two haplotypes with total lengths of 468.52 megabases and 468.51 megabases. Most of haplotype 1 (98.99%) is scaffolded into 14 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequences have lengths of 521.58 and 155.53 kilobases and the plastid genome assembly has a length of 160.76 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.
SN  - 2398-502X
ER  -