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Simulation-Free Learning of GP-SDEs from Irregular Observations

Abstract

Gaussian process stochastic differential equations (GP-SDEs) provide a flexible Bayesian model for unknown continuous-time state dynamics with uncertainty quantification, but learning and inference from noisy and irregular observations remain computationally challenging. To address this issue, we propose GP-SDE Matching, a simulation-free variational framework for Bayesian GP drift learning and continuous-time state smoothing. We analytically marginalize the sparse GP posterior to derive a tractable drift-matching objective that accounts for both the posterior mean and uncertainty of the unknown drift. To handle irregular observations, we further introduce an irregular-time-aware variational state posterior that incorporates the actual observation times during both encoding and continuous-time marginal querying. Experiments on the stochastic Lorenz--63 system demonstrate substantially improved drift recovery and state reconstruction under irregular observations, while five system identification benchmarks show robust forecasting under increasing observation sparsity and competitive performance against existing latent-SDE and state-space methods.

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BibTeX
@misc{lin2026simulationfree,
  title = {{Simulation-Free Learning of GP-SDEs from Irregular Observations}},
  author = {Zhidi Lin and Yuhao Liu and Ying Li and Edwin Fong and Petar Djurić},
  howpublished = {arXiv},
  year = {2026},
  month = sep,
  doi = {10.48550/arxiv.2609.33112},
  eprint = {2609.33112},
  archivePrefix = {arXiv},
  url = {https://arxiv.org/abs/2609.33112},
}
RIS
TY  - UNPB
TI  - Simulation-Free Learning of GP-SDEs from Irregular Observations
AU  - Zhidi Lin
AU  - Yuhao Liu
AU  - Ying Li
AU  - Edwin Fong
AU  - Petar Djurić
PY  - 2026
DA  - 2026/09/27
PB  - arXiv
DO  - 10.48550/arxiv.2609.33112
UR  - https://arxiv.org/abs/2609.33112
AB  - Gaussian process stochastic differential equations (GP-SDEs) provide a flexible Bayesian model for unknown continuous-time state dynamics with uncertainty quantification, but learning and inference from noisy and irregular observations remain computationally challenging. To address this issue, we propose GP-SDE Matching, a simulation-free variational framework for Bayesian GP drift learning and continuous-time state smoothing. We analytically marginalize the sparse GP posterior to derive a tractable drift-matching objective that accounts for both the posterior mean and uncertainty of the unknown drift. To handle irregular observations, we further introduce an irregular-time-aware variational state posterior that incorporates the actual observation times during both encoding and continuous-time marginal querying. Experiments on the stochastic Lorenz--63 system demonstrate substantially improved drift recovery and state reconstruction under irregular observations, while five system identification benchmarks show robust forecasting under increasing observation sparsity and competitive performance against existing latent-SDE and state-space methods.
ER  -