Cadmium-driven specific endophytic bacteria and their role in rice grains yield and cadmium accumulation.
4 affiliations
- 1Life Science and Technology & Medical Faculty, Kunming University of Science and Technology, Kunming, 650500, China.
- 2Department of Plant Biology, Rutgers University, New Brunswick, NJ, 08901, USA.
- 3Kunming Academy of Agricultural Sciences, Kunming, 650500, China.
- 4Life Science and Technology & Medical Faculty, Kunming University of Science and Technology, Kunming, 650500, China. [email protected].
Abstract
Background and aims
The endophytic communities of plants are significantly influenced by heavy metal stress. Conversely, endophytes contribute to host plants' heavy metal tolerance and accumulation. This study evaluates the impact of cadmium (Cd) on rice, and investigates the role of endophytes in Cd accumulation in rice.Methods
The endophytic bacterial community of rice under Cd stress was investigated using both culture-dependent and culture-independent methods. In addition, the roles of endophytic bacteria in rice yield and Cd accumulation in rice grains were examined.Results
The composition of rice endophytic bacterial communities was shaped by both tissue type and soil Cd concentration. Elevated Cd concentration reduced the endophyte alpha diversity, altered the dominant genera, and promoted a less complex co-occurrence network. Partic ularly, specific bacterial endophytes (e.g., Methylocystis, Bradyrhizobium and Brevundimonas) were significantly correlated with grain Cd concentration, suggesting their potential role in regulating Cd accumulation in rice grain. A core microbiota, including Bradyrhizobium, Brevundimonas, Acinetobacter, Agrobacterium, etc. consistently presented across all Cd levels, suggesting their essential, stress-independent functions. Some of them exhibited multiple plant growth-promoting traits and Cd tolerance. Pot experiments showed the strain GCRD9 (Agrobacterium sp.) could promote rice growth and increase thousand-grain weight, while reducing Cd accumulation in grains by 55.6%.Conclusions
These findings provide new insights into the soil-crop-endophyte interactions and highlight the potential of specific bacterial strains for developing endophyte-assisted crop strategies to ensure safe crop production under heavy metal stress.
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BibTeX
@article{lai2026cadmiumdriven,
title = {{Cadmium-driven specific endophytic bacteria and their role in rice grains yield and cadmium accumulation.}},
author = {Yibin Lai and Weijun Gong and Xiong Zeng and Salma Saeed Khan and James F White and Dezhi Yang and Rongbo Li and Haiyan Li},
journal = {BMC microbiology},
year = {2026},
month = jul,
doi = {10.1186/s12866-026-05440-7},
url = {https://europepmc.org/article/MED/42902145},
note = {CC BY-NC-ND},
}
RIS
TY - JOUR
TI - Cadmium-driven specific endophytic bacteria and their role in rice grains yield and cadmium accumulation.
AU - Yibin Lai
AU - Weijun Gong
AU - Xiong Zeng
AU - Salma Saeed Khan
AU - James F White
AU - Dezhi Yang
AU - Rongbo Li
AU - Haiyan Li
PY - 2026
DA - 2026/07/01
JO - BMC microbiology
DO - 10.1186/s12866-026-05440-7
UR - https://europepmc.org/article/MED/42902145
AB - Background and aims The endophytic communities of plants are significantly influenced by heavy metal stress. Conversely, endophytes contribute to host plants' heavy metal tolerance and accumulation. This study evaluates the impact of cadmium (Cd) on rice, and investigates the role of endophytes in Cd accumulation in rice.Methods The endophytic bacterial community of rice under Cd stress was investigated using both culture-dependent and culture-independent methods. In addition, the roles of endophytic bacteria in rice yield and Cd accumulation in rice grains were examined.Results The composition of rice endophytic bacterial communities was shaped by both tissue type and soil Cd concentration. Elevated Cd concentration reduced the endophyte alpha diversity, altered the dominant genera, and promoted a less complex co-occurrence network. Partic ularly, specific bacterial endophytes (e.g., Methylocystis, Bradyrhizobium and Brevundimonas) were significantly correlated with grain Cd concentration, suggesting their potential role in regulating Cd accumulation in rice grain. A core microbiota, including Bradyrhizobium, Brevundimonas, Acinetobacter, Agrobacterium, etc. consistently presented across all Cd levels, suggesting their essential, stress-independent functions. Some of them exhibited multiple plant growth-promoting traits and Cd tolerance. Pot experiments showed the strain GCRD9 (Agrobacterium sp.) could promote rice growth and increase thousand-grain weight, while reducing Cd accumulation in grains by 55.6%.Conclusions These findings provide new insights into the soil-crop-endophyte interactions and highlight the potential of specific bacterial strains for developing endophyte-assisted crop strategies to ensure safe crop production under heavy metal stress.
SN - 1471-2180
ER -