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Peer-reviewedCC BY 4.0Molecules

Synthesis of 3-Amino-4-(Hydroxymethyl)-β-Lactam Branch Point and Its Late-Stage C4 Functionalization with Ceftaroline-Sidechain Monobactams and Their Biological Evaluation

  1. 1Department of Pharmaceutical Chemistry, Faculty of Pharmacy, University of Ljubljana, Aškerčeva cesta 7, 1000 Ljubljana, Slovenia
  2. 2Institute of Microbiology and Parasitology, Veterinary Faculty, University of Ljubljana, Gerbičeva 60, 1000 Ljubljana, Slovenia

Abstract

Monocyclic β-lactams are an underexplored subclass of β-lactam antibiotics active against Gram-negative pathogens, but access to them requires long sequences reported across the patent and primary literature. We compare two alternative routes to 3-amino-4-(hydroxymethyl)-2-azetidinone, a synthon carrying handles at N1, C3 and C4, starting from ethyl glyoxylate and from (R)-glyceraldehyde acetonide. Both are assembled from published transformations; reported here are isolated yields for every step, including the conditions that failed, and execution of the β-lactam-forming sequence on a 50 g scale. Removal of the 2,4-dimethoxybenzyl group was strongly concentration-dependent, giving 94% on the glyoxylate-derived ester against 70% on the acetonide-derived alcohol, whereas the acetonide route replaces a low-yielding NaBH4 ester reduction (43 to 57%) with a near-quantitative oxidative cleavage/reduction sequence. Diverting one late-stage intermediate through copper-catalyzed azide–alkyne cycloaddition or direct thioether alkylation gave three sulfonated monobactams bearing a ceftaroline-derived C4 sidechain, in 0.10 to 0.29% overall yield over 15 steps. None reduced S. pneumoniae PBP1b activity below 50% at 100 μM, against an IC50 of 4.93 μM for aztreonam, and none inhibited wild-type E. coli or S. aureus at 128 μg/mL; weak inhibition was seen only in efflux-deficient and outer-membrane-permeabilized E. coli. C4 substitution through either linkage supports activity when the appended group also provides an uptake vector, which the ceftaroline-derived side chain does not, and it conferred no measurable target affinity either.

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BibTeX
@article{kavas2026synthesis,
  title = {{Synthesis of 3-Amino-4-(Hydroxymethyl)-β-Lactam Branch Point and Its Late-Stage C4 Functionalization with Ceftaroline-Sidechain Monobactams and Their Biological Evaluation}},
  author = {Vid Kavaš and Majda Golob and Anže Meden and Martina Hrast Rambaher and Stanislav Gobec},
  journal = {Molecules},
  year = {2026},
  month = oct,
  doi = {10.3390/molecules31203637},
  url = {https://www.mdpi.com/1420-3049/31/20/3637},
  note = {CC BY 4.0},
}
RIS
TY  - JOUR
TI  - Synthesis of 3-Amino-4-(Hydroxymethyl)-β-Lactam Branch Point and Its Late-Stage C4 Functionalization with Ceftaroline-Sidechain Monobactams and Their Biological Evaluation
AU  - Vid Kavaš
AU  - Majda Golob
AU  - Anže Meden
AU  - Martina Hrast Rambaher
AU  - Stanislav Gobec
PY  - 2026
DA  - 2026/10/01
JO  - Molecules
DO  - 10.3390/molecules31203637
UR  - https://www.mdpi.com/1420-3049/31/20/3637
AB  - Monocyclic β-lactams are an underexplored subclass of β-lactam antibiotics active against Gram-negative pathogens, but access to them requires long sequences reported across the patent and primary literature. We compare two alternative routes to 3-amino-4-(hydroxymethyl)-2-azetidinone, a synthon carrying handles at N1, C3 and C4, starting from ethyl glyoxylate and from (R)-glyceraldehyde acetonide. Both are assembled from published transformations; reported here are isolated yields for every step, including the conditions that failed, and execution of the β-lactam-forming sequence on a 50 g scale. Removal of the 2,4-dimethoxybenzyl group was strongly concentration-dependent, giving 94% on the glyoxylate-derived ester against 70% on the acetonide-derived alcohol, whereas the acetonide route replaces a low-yielding NaBH4 ester reduction (43 to 57%) with a near-quantitative oxidative cleavage/reduction sequence. Diverting one late-stage intermediate through copper-catalyzed azide–alkyne cycloaddition or direct thioether alkylation gave three sulfonated monobactams bearing a ceftaroline-derived C4 sidechain, in 0.10 to 0.29% overall yield over 15 steps. None reduced S. pneumoniae PBP1b activity below 50% at 100 μM, against an IC50 of 4.93 μM for aztreonam, and none inhibited wild-type E. coli or S. aureus at 128 μg/mL; weak inhibition was seen only in efflux-deficient and outer-membrane-permeabilized E. coli. C4 substitution through either linkage supports activity when the appended group also provides an uptake vector, which the ceftaroline-derived side chain does not, and it conferred no measurable target affinity either.
SN  - 1420-3049
ER  -