Identification of shared diagnostic biomarkers and immune-related mechanisms between sepsis and thoracic aortic aneurysm based on integrated bioinformatics and machine learning approaches
- 1Department of Cardiothoracic Surgery, The First Affiliated Hospital, Hengyang Medical School, University of South China, Hengyang City, Hunan Province, China
Abstract
Background: Sepsis and thoracic aortic aneurysm (TAA) share pathological features of inflammation and vascular dysfunction, yet their molecular connections remain unclear. Methods: Transcriptomic datasets of sepsis and TAA from GEO were integrated to identify shared differentially expressed genes (DEGs). Functional enrichment and gene set enrichment analyses were performed to explore potential pathways. Machine learning models were applied to identify candidate genes with discriminatory potential, followed by immune infiltration analysis and assessment of gene expression in lipopolysaccharide (LPS)-treated vascular smooth muscle cells (VSMCs). Results: A total of 193 shared DEGs were identified, mainly enriched in T cell activation, Th17 differentiation, and oxidative stress–related pathways. Five candidate genes (ARG1, IL18R1, LIX1L, TRIM32, and PRKCH) were selected through sequential machine-learning analysis and showed generally reproducible expression patterns across independent datasets. Their expression was associated with estimated immune cell proportions. In LPS-treated VSMCs, ARG1 and IL18R1 were upregulated, whereas LIX1L was downregulated. Conclusion: Sepsis and TAA share common transcriptional signatures involving immune dysregulation and metabolic stress. ARG1 and IL18R1 may represent candidate molecular features associated with inflammatory and vascular responses.
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BibTeX
@article{she2026identification,
title = {{Identification of shared diagnostic biomarkers and immune-related mechanisms between sepsis and thoracic aortic aneurysm based on integrated bioinformatics and machine learning approaches}},
author = {Chengqun She and Hao Deng and Yaoguang Feng and Chaozhong Long and Juan Wu},
journal = {PLOS One},
year = {2026},
month = oct,
doi = {10.1371/journal.pone.0359784},
url = {https://doi.org/10.1371/journal.pone.0359784},
note = {CC BY 4.0},
}
RIS
TY - JOUR
TI - Identification of shared diagnostic biomarkers and immune-related mechanisms between sepsis and thoracic aortic aneurysm based on integrated bioinformatics and machine learning approaches
AU - Chengqun She
AU - Hao Deng
AU - Yaoguang Feng
AU - Chaozhong Long
AU - Juan Wu
PY - 2026
DA - 2026/10/08
JO - PLOS One
DO - 10.1371/journal.pone.0359784
UR - https://doi.org/10.1371/journal.pone.0359784
AB - Background: Sepsis and thoracic aortic aneurysm (TAA) share pathological features of inflammation and vascular dysfunction, yet their molecular connections remain unclear. Methods: Transcriptomic datasets of sepsis and TAA from GEO were integrated to identify shared differentially expressed genes (DEGs). Functional enrichment and gene set enrichment analyses were performed to explore potential pathways. Machine learning models were applied to identify candidate genes with discriminatory potential, followed by immune infiltration analysis and assessment of gene expression in lipopolysaccharide (LPS)-treated vascular smooth muscle cells (VSMCs). Results: A total of 193 shared DEGs were identified, mainly enriched in T cell activation, Th17 differentiation, and oxidative stress–related pathways. Five candidate genes (ARG1, IL18R1, LIX1L, TRIM32, and PRKCH) were selected through sequential machine-learning analysis and showed generally reproducible expression patterns across independent datasets. Their expression was associated with estimated immune cell proportions. In LPS-treated VSMCs, ARG1 and IL18R1 were upregulated, whereas LIX1L was downregulated. Conclusion: Sepsis and TAA share common transcriptional signatures involving immune dysregulation and metabolic stress. ARG1 and IL18R1 may represent candidate molecular features associated with inflammatory and vascular responses.
SN - 1932-6203
ER -