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PreprintCC BY-NC-ND 4.0arXiv

Mechanistic Framework for Multicomponent Nanoparticle Assembly: Predicting RNA-lipid and PEI-DNA nanoparticle assembly

Abstract

The assembly of multicomponent nanoparticles is often kinetically controlled and exhibits strong pathway dependence. Transport, solvent exchange, nucleation/growth, and collision-driven coalescence together determine not only ensemble-averaged properties but also particle-to-particle compositional heterogeneity. Here, we present a computational modeling framework for predicting nanoparticle property distributions by coupling processing conditions, early-stage self-assembly physics, and molecular chemical details with kinetic Monte Carlo (kMC) simulations. The framework combines (i) mixing conditions with solvent-exchange-mediated particle initialization and growth, and (ii) kMC simulations that resolve stochastic collision histories, electrostatics-controlled coalescence, and composition at the level of individual particles. Applied to mRNA lipid nanoparticles, the model predicts size-loading correlations and provides insight into how processing-dependent assembly pathways lead to heterogeneous payload distributions. The kMC simulations further provide merging lineage histories, which explain the emergence of log-normal volume and payload distributions through multiplicative particle-growth pathways. The same framework is also applied to PEI-DNA polyelectrolytic complexation, yielding single-particle-resolved DNA-PEI stoichiometry distributions. The framework and its open-source implementation, FormLNP, provide a process-aware route to predicting and controlling single-particle property distributions across a broad range of multicomponent nanoparticle systems.

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BibTeX
@misc{pial2026mechanistic,
  title = {{Mechanistic Framework for Multicomponent Nanoparticle Assembly: Predicting RNA-lipid and PEI-DNA nanoparticle assembly}},
  author = {Turash Haque Pial and Tine Curk},
  howpublished = {arXiv},
  year = {2026},
  month = sep,
  doi = {10.48550/arxiv.2609.04029},
  eprint = {2609.04029},
  archivePrefix = {arXiv},
  url = {https://arxiv.org/abs/2609.04029},
  note = {CC BY-NC-ND 4.0},
}
RIS
TY  - UNPB
TI  - Mechanistic Framework for Multicomponent Nanoparticle Assembly: Predicting RNA-lipid and PEI-DNA nanoparticle assembly
AU  - Turash Haque Pial
AU  - Tine Curk
PY  - 2026
DA  - 2026/09/03
PB  - arXiv
DO  - 10.48550/arxiv.2609.04029
UR  - https://arxiv.org/abs/2609.04029
AB  - The assembly of multicomponent nanoparticles is often kinetically controlled and exhibits strong pathway dependence. Transport, solvent exchange, nucleation/growth, and collision-driven coalescence together determine not only ensemble-averaged properties but also particle-to-particle compositional heterogeneity. Here, we present a computational modeling framework for predicting nanoparticle property distributions by coupling processing conditions, early-stage self-assembly physics, and molecular chemical details with kinetic Monte Carlo (kMC) simulations. The framework combines (i) mixing conditions with solvent-exchange-mediated particle initialization and growth, and (ii) kMC simulations that resolve stochastic collision histories, electrostatics-controlled coalescence, and composition at the level of individual particles. Applied to mRNA lipid nanoparticles, the model predicts size-loading correlations and provides insight into how processing-dependent assembly pathways lead to heterogeneous payload distributions. The kMC simulations further provide merging lineage histories, which explain the emergence of log-normal volume and payload distributions through multiplicative particle-growth pathways. The same framework is also applied to PEI-DNA polyelectrolytic complexation, yielding single-particle-resolved DNA-PEI stoichiometry distributions. The framework and its open-source implementation, FormLNP, provide a process-aware route to predicting and controlling single-particle property distributions across a broad range of multicomponent nanoparticle systems.
ER  -