Bioinformatics & computational biology
2,115 studies185 in 7 days881 in 30 days
Filters
Latest
2,115 studies
- MI-PEFT: Mixture-of-Experts Integrated Parameter-Efficient Fine-Tuning Protein Language Models Improves Acidophilic Proteins Classification
- The Accuracy Paradox: Empirical Diagnostic of Default Decision Thresholds in Multi-Label Enzyme Commission Prediction [With Code]
- Jointly estimating transmissibility and prior immunity from epidemic time series
- Geometric Reliability of Neural Population Codes: Sampling Calibration and Within-Session Nonstationarity
- Completion of DNA replication is constrained by the spatiotemporal organisation of origin firing
- Pareto Suboptimal Resource Allocation and Microbial Growth
- Machine Learning-Guided Classification of Druggable Pockets and Phylogenetic Druggability Transfer Across the Human Kinome
- ABCP_finder: A Transformer Embedding-Based Prediction of Anti-Breast Cancer Peptides
- Iterative Gene Enrichment Analysis: interpretable networks for human and AI-assisted biological insights
- A structural antibody benchmark for leakage-aware deep-learning evaluation
- pydreg: a fast Python package for identifying active cis-regulatory elements from nascent transcription
- Detection-Guided Beamforming for Efficient Bat Localisation
- HyphAeon: Attention on Evolution Across Deep Time Transforms Comparative Genomics
- Predicted and experimental protein-ligand coordinates with distance labels and evaluation splits
- How do Co-Folding Models Organize Structural Information?
- MutCleaner: Cleaning and Standardizing Biological Mutation Datasets for Variant Effect Prediction
- Inverse FoldDir: Structure-conditioned Protein Sequence Design by Dirichlet Flow Matching
- MedGSSR: Generalizable Medical Image Super-Resolution 3D Reconstruction via Hierarchical Feed-forward Gaussian Splatting
- SpaCoEx: Sparse Gene Selection for Spatially Varying Co-expression in Spatial Transcriptomics
- Explainable Machine Learning and Epigenomic Profiling Decipher the Topological Determinants of Lentiviral Integration and Longitudinal Persistence in SCID-X1 Gene Therapy
- spAlignDE unifies cross-sample and cross-modal spatial alignment with mismatch-aware differential expression
- DNT: Diploid Genomic Foundation Model
- SpectroVQ: Noise-Aware Compression of Proteomics Data via Vector-Quantized Deep Learning improves MS/MS data storage and Peptide Identification
- Geomosaic: a flexible bioinformatics platform integrating complementary metagenomic analyses from sequencing reads to genomes
- scOLAR: Ontology-Anchored Open-Set Annotation of Single-Cell RNA-seq Data