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Systems & synthetic biology

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1,510 studies

  1. Three-Dimensional Fluid-Structure Interaction Reveals Trade-offs Among Oxygen Delivery, Shear, and Washout in Pediatric Roller-Pump Cardiopulmonary Bypass
    Yunpeng Tu, Yi-Ting Yeh, Alex de Lecea +5
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxivPMC
  2. Growing Macroscopic Functional Human Tissues on 3D Printed Peptide Hydrogels
    Adam C. Farsheed, Jonathan T. Makhoul, Justin Liu +16
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxivPMC
  3. High-throughput mapping of kinase-substrate interactions with protein language models and phospho-PCA
    C. Yu, E. Pao, D. Van Valen
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxivPMC
  4. Effects of dose-response relationships on cellular information transmission
    Steven S. Andrews, H. Steven Wiley, Roger Brent +1
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxivPMC
  5. Leukemic fitness predicts treatment-free remission and guides adaptive therapy in chronic myeloid leukemia
    A. C. Fassoni, N. W. Silva, I. Glauche
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  6. Quanta microscopy enables fluorescence imaging at the native bit-plane rate
    Jooyeong Yun, Keyi Han, Aleksandra Janusz-Kaminska +6
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxivPMC
  7. Deep Learning Based Cell Segmentation of 3D Confocal Images of Wood for Enzymatic Hydrolysis Applications
    A. Faraj, S. Hossein Khani, G. Paës +1
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  8. Single-cell profiling quantifies the dose gap between population-average and complete pY-STAT1/3 suppression by JAK inhibitors
    K. E. Zakrzewska, J. Walczak, K. Nienałtowski +6
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  9. A multiscale pharmacokinetic-Boolean modelling framework for ibrutinib resistance in a Chronic Lymphocytic Leukaemia case study
    M. Marku, C. Pineau, M. Hurtado +6
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  10. Personalised prediction of anomalous bone regeneration in multiple myeloma patients
    F. Gibson, R. E. Andrews, M. A. Lawson +10
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  11. Single-vector AAV delivery of En-ISPmu1 and donor DNA for in vivo targeted genome integration
    A. Conci, I. Bonuzzi, M. Ciciani +7
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  12. Compact CRISPR-based genetic circuitry using a miniature genome-integrated Cas12m protein
    S. H.-N. Joshi, C. Jenkins, D. Ulaeto +1
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  13. From group-level neurophysiological biomarkers to individual-level phenotyping to identify mechanisms of neurodegenerative disease
    A. Jafarian, L. E. Hughes, M. Naessens +8
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  14. In situ loading of biologics on and tissue redirection of circulating extracellular vesicles with an anchoring nanobody
    G. Han, L. Zhong, H. Yu +11
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  15. Engineered Mycobacterium smegmatis-based intrapleural immunotherapy remodels the pleural immune microenvironment for malignant pleural effusion treatment
    Leilei Zhou, Zhaoye Qian, Rong Yao +6
    Frontiers in PharmacologyPeer-reviewedCC BY 4.0Full textSystems & synthetic biologyCrossref
  16. Hydraulic performance of 14-G hemodialysis catheters versus an 8-Fr arterial cannula in a mock 3-kg small-dog cardiopulmonary bypass circuit
    Keizo Wauchi, Chisato Ikubo, Hirohito Imada +2
    PLOS OnePeer-reviewedCC BYFull textSystems & synthetic biologyZoology & animal behaviourPLOSEurope PMC
  17. Rapid thermoforming of polycarbonate cell culture accessories from 3D printed molds
    Ganesh Malayath, Fei Wang, Chao Zhou +1
    PLOS OnePeer-reviewedCC BYFull textDevelopmental biologySystems & synthetic biologyPLOSEurope PMC
  18. Removal of VirD2 from a synthetic T-DNA complex of Agrobacterium by the host DNA repair protein TDP2
    Benoît Lacroix, Vitaly Citovsky
    PLOS PathogensPeer-reviewedCC BY 4.0Full textGenetics & genomicsPlant biologySystems & synthetic biologyPLOSPMC
  19. HelixWings enables AI-driven enzyme engineering for biomimetic cofactor utilization
    Chuanxi Zhang, Yinghui Feng, Ying Ji +13
    iSciencePeer-reviewedCC BY-NC-ND 4.0Full textBioinformatics & computational biologySystems & synthetic biologyCell PressCrossref
  20. Diatom-based treatment of geothermal brines to selectively remove silicon, retain lithium for downstream recovery, and produce omega-3 fatty acids
    Mohammed Rehmanji, Alastair Skeffington, Karen A. Hudson-Edwards +1
    iSciencePeer-reviewedCC BY 4.0Full textSystems & synthetic biologyCell PressCrossrefPMC
  21. An engineered α-1,3-glucanase-derived probe enables sensitive detection of α-1,3-glucan and reveals its soluble release by Aspergillus
    Kento Suzuki, Masahiro Kimura, Ken Miyazawa +2
    iSciencePeer-reviewedCC BY 4.0Full textMicrobiologySystems & synthetic biologyCell PressCrossrefPMC
  22. Expanding the galactose oxidase substrate repertoire via a multi-modal computational strategy
    Jhoann M.T. Miyajima, Dillon W.P. Tay, Wan Lin Yeo +10
    iSciencePeer-reviewedCC BY-NC-ND 4.0Full textSystems & synthetic biologyCell PressCrossrefPMC
  23. Amino Acid Metabolic Signature Links Pediatric Environmental Enteric Dysfunction to Maternal-Fetal Growth Restriction Across Two Independent Cohorts
    Shahzaib Khan, Nathaniel Ribeiro, Waqasuddin Khan +12
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxivPMC
  24. Glutamine-derived NADH fuels lactate production to maximize ATP yield under oxygen consumption constraints in head and neck cancer
    C. Odendaal, R. Dalhuisen, M. Hoving +9
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  25. Effect of Clover versus Zipping on Annular Geometry and Dynamics in Tricuspid Edge-to-Edge Repair
    Magda Piekarska, Tomasz Stacel, Collin E. Haese +9
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxivPMC