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Peer-reviewedCC BYnpj Computational Materials

Experiment automation agents: automating materials characterization with vision language model agents

  1. 1Advanced Photon Source, Argonne National Laboratory, Lemont, IL, USA
  2. 2Data Science and Learning Division, Argonne National Laboratory, Lemont, IL, USA
  3. 3Department of Radiation Oncology, Northwestern University, Chicago, IL, USA

Abstract

We present Experiment Automation Agents (EAA), a vision-language-model-driven agentic system designed to automate complex experimental microscopy workflows. EAA integrates multimodal reasoning, tool-augmented action, and optional long-term memory to support both autonomous procedures and interactive user-guided measurements. Built on a flexible task-manager architecture, the system enables workflows ranging from fully agent-driven automation to logic-defined routines that embed localized LLM queries. EAA further provides a modern tool ecosystem with two-way compatibility for Model Context Protocol (MCP), allowing instrument-control tools to be consumed or served across applications. We demonstrate EAA at an imaging beamline at the Advanced Photon Source, including automated zone plate focusing, natural language-described feature search, and interactive data acquisition. These results illustrate how vision-capable agents can enhance beamline efficiency, reduce operational burden, and lower the expertise barrier for users.

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BibTeX
@article{du2026experiment,
  title = {{Experiment automation agents: automating materials characterization with vision language model agents}},
  author = {Ming Du and Yanqi Luo and Srutarshi Banerjee and Michael Wojcik and Jelena Popovic and Mathew J. Cherukara},
  journal = {npj Computational Materials},
  year = {2026},
  month = jul,
  doi = {10.1038/s41524-026-02213-8},
  url = {https://doi.org/10.1038/s41524-026-02213-8},
  note = {CC BY},
}
RIS
TY  - JOUR
TI  - Experiment automation agents: automating materials characterization with vision language model agents
AU  - Ming Du
AU  - Yanqi Luo
AU  - Srutarshi Banerjee
AU  - Michael Wojcik
AU  - Jelena Popovic
AU  - Mathew J. Cherukara
PY  - 2026
DA  - 2026/07/30
JO  - npj Computational Materials
DO  - 10.1038/s41524-026-02213-8
UR  - https://doi.org/10.1038/s41524-026-02213-8
AB  - We present Experiment Automation Agents (EAA), a vision-language-model-driven agentic system designed to automate complex experimental microscopy workflows. EAA integrates multimodal reasoning, tool-augmented action, and optional long-term memory to support both autonomous procedures and interactive user-guided measurements. Built on a flexible task-manager architecture, the system enables workflows ranging from fully agent-driven automation to logic-defined routines that embed localized LLM queries. EAA further provides a modern tool ecosystem with two-way compatibility for Model Context Protocol (MCP), allowing instrument-control tools to be consumed or served across applications. We demonstrate EAA at an imaging beamline at the Advanced Photon Source, including automated zone plate focusing, natural language-described feature search, and interactive data acquisition. These results illustrate how vision-capable agents can enhance beamline efficiency, reduce operational burden, and lower the expertise barrier for users.
SN  - 2057-3960
ER  -