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Peer-reviewedLicence not statedNature Methods

Decoding sequence determinants of gene expression in diverse cellular and disease states

  • Avantika Lal1,2
  • Alexander Karollus3,4,5,6
  • Laura M. Gunsalus3
  • David Garfield7,8
  • Surag Nair3
  • Alex M. Tseng3
  • M. Grace Gordon9,10
  • John Blischak11
  • Bryce Van De Geijn11
  • Tushar Bhangale11
  • Jenna L. Collier3
  • Nathaniel Diamant3
4 more authors
  • Tommaso Biancalani3
  • Héctor Corrada Bravo3
  • Gabriele Scalia3
  • Gökçen Eraslan12
12 affiliations
  1. 1Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA, USA. [email protected]
  2. 2Biology Research
  3. 3Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA, USA
  4. 4Munich Center for Machine Learning, Munich, Germany
  5. 5School of Computation, Information and Technology, Technical University of Munich, Munich, Germany
  6. 6Department of Informatics, Technical University of Munich, Garching, German
  7. 7OMNI Bioinformatics and Department of Regenerative Medicine, Genentech, South San Francisco, CA, USA
  8. 8OMNI Bioinformatics and Department of Regenerative Medicine, Genentech, South San Francisco, CA 94080, USA
  9. 9Department of Cellular and Tissue Genomics, Genentech Research and Early Development, Genentech, South San Francisco, CA, USA
  10. 10Department of Cellular and Tissue Genomics, Genentech Research and Early Development, Genentech, South San Francisco, CA 94080, US
  11. 11Department of Human Genetics, Genentech, South San Francisco, CA, USA
  12. 12Biology Research | AI Development, gRED Computational Sciences, Genentech, South San Francisco, CA, USA. [email protected]
Open at sourceDOICite

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Cite

BibTeXRIS
BibTeX
@article{lal2026decoding,
  title = {{Decoding sequence determinants of gene expression in diverse cellular and disease states}},
  author = {Avantika Lal and Alexander Karollus and Laura M. Gunsalus and David Garfield and Surag Nair and Alex M. Tseng and M. Grace Gordon and John Blischak and Bryce Van De Geijn and Tushar Bhangale and Jenna L. Collier and Nathaniel Diamant and Tommaso Biancalani and Héctor Corrada Bravo and Gabriele Scalia and Gökçen Eraslan},
  journal = {Nature Methods},
  year = {2026},
  month = may,
  doi = {10.1038/s41592-026-03102-0},
  url = {https://doi.org/10.1101/2024.10.09.617507},
}
RIS
TY  - JOUR
TI  - Decoding sequence determinants of gene expression in diverse cellular and disease states
AU  - Avantika Lal
AU  - Alexander Karollus
AU  - Laura M. Gunsalus
AU  - David Garfield
AU  - Surag Nair
AU  - Alex M. Tseng
AU  - M. Grace Gordon
AU  - John Blischak
AU  - Bryce Van De Geijn
AU  - Tushar Bhangale
AU  - Jenna L. Collier
AU  - Nathaniel Diamant
AU  - Tommaso Biancalani
AU  - Héctor Corrada Bravo
AU  - Gabriele Scalia
AU  - Gökçen Eraslan
PY  - 2026
DA  - 2026/05/25
JO  - Nature Methods
DO  - 10.1038/s41592-026-03102-0
UR  - https://doi.org/10.1101/2024.10.09.617507
SN  - 1548-7091
SN  - 1548-7105
ER  -