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Peer-reviewedCC BY 4.0Science Advances

Effect of cellular nutrient economy on the evolution of genome size in phytoplankton

Abstract

The origin of genome size variation remains a central question in evolutionary biology. Previous analyses suggest that the energetic costs of small insertions and deletions (indels) influence genome size by altering the cellular energy budget. Here, we present a theoretical framework for genome evolution in phytoplankton-the main producers of the sunlit ocean-whose growth depends on nutrient availability. We derive an expression for the selection coefficient on indels as a function of four parameters, including the minimum amount of nutrient inside the cell. Parameter estimates indicate that 1-bp indels can be counterselected in phytoplankton with minimal nutrient requirements. We then test three predictions of nutrient-driven selection on genome evolution. Altogether, this model provides a quantitative and mathematical basis for the genome streamlining hypothesis.

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BibTeX
@article{caceres2026effect,
  title = {{Effect of cellular nutrient economy on the evolution of genome size in phytoplankton}},
  author = {Carlos Caceres and Marc Krasovec and Olivier Crispi and Sebastien Gourbiere and Gwenael Piganeau},
  journal = {Science Advances},
  year = {2026},
  month = jul,
  doi = {10.1126/sciadv.aee2207},
  url = {https://hal.science/hal-05348523v2},
  note = {CC BY 4.0},
}
RIS
TY  - JOUR
TI  - Effect of cellular nutrient economy on the evolution of genome size in phytoplankton
AU  - Carlos Caceres
AU  - Marc Krasovec
AU  - Olivier Crispi
AU  - Sebastien Gourbiere
AU  - Gwenael Piganeau
PY  - 2026
DA  - 2026/07/08
JO  - Science Advances
DO  - 10.1126/sciadv.aee2207
UR  - https://hal.science/hal-05348523v2
AB  - The origin of genome size variation remains a central question in evolutionary biology. Previous analyses suggest that the energetic costs of small insertions and deletions (indels) influence genome size by altering the cellular energy budget. Here, we present a theoretical framework for genome evolution in phytoplankton-the main producers of the sunlit ocean-whose growth depends on nutrient availability. We derive an expression for the selection coefficient on indels as a function of four parameters, including the minimum amount of nutrient inside the cell. Parameter estimates indicate that 1-bp indels can be counterselected in phytoplankton with minimal nutrient requirements. We then test three predictions of nutrient-driven selection on genome evolution. Altogether, this model provides a quantitative and mathematical basis for the genome streamlining hypothesis.
SN  - 2375-2548
ER  -