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PreprintCC BY-NCbioRxiv

Dual role of the RIG-I 2CARD as a signaling module and a brake on dsRNA translocation

  1. 1Kanazawa University

Abstract

RIG-I is an innate immune receptor for viral double-stranded RNA (dsRNA). Upon binding dsRNA, RIG-I nucleates MAVS filaments through its two caspase activation and recruitment domains (2CARD). However, how the 2CARD behaves during activation has remained unclear. Using high-speed atomic force microscopy, we visualized the 2CARD in full-length RIG-I across its apo, dsRNA-bound, translocating, multimeric, and polyubiquitin-bound states. Protrusions consistent with the 2CARD appeared only transiently in the apo state, whereas a mobile 2CARD emerged upon RNA binding. During ATP-driven translocation, wild-type RIG-I moved approximately twofold slower and showed more frequent pauses and multimers than RIG-I {Delta}2CARD. Within multimers, 2CARDs formed a complex that polyubiquitin stabilized into larger, dsRNA-deforming assemblies. These findings reveal the 2CARD as a brake on the RIG-I motor, beyond signaling.

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BibTeX
@misc{kondo2026dual,
  title = {{Dual role of the RIG-I 2CARD as a signaling module and a brake on dsRNA translocation}},
  author = {S. Kondo and J. Zhang and K. Matsushima and N. Kurihara and H. Flechsig and K. Umeda and N. Kodera and K. Kato and M. Shibata},
  howpublished = {bioRxiv},
  year = {2026},
  month = oct,
  doi = {10.64898/2026.10.13.758695},
  url = {https://www.biorxiv.org/content/10.64898/2026.10.13.758695v1},
  note = {CC BY-NC},
}
RIS
TY  - UNPB
TI  - Dual role of the RIG-I 2CARD as a signaling module and a brake on dsRNA translocation
AU  - S. Kondo
AU  - J. Zhang
AU  - K. Matsushima
AU  - N. Kurihara
AU  - H. Flechsig
AU  - K. Umeda
AU  - N. Kodera
AU  - K. Kato
AU  - M. Shibata
PY  - 2026
DA  - 2026/10/13
PB  - bioRxiv
DO  - 10.64898/2026.10.13.758695
UR  - https://www.biorxiv.org/content/10.64898/2026.10.13.758695v1
AB  - RIG-I is an innate immune receptor for viral double-stranded RNA (dsRNA). Upon binding dsRNA, RIG-I nucleates MAVS filaments through its two caspase activation and recruitment domains (2CARD). However, how the 2CARD behaves during activation has remained unclear. Using high-speed atomic force microscopy, we visualized the 2CARD in full-length RIG-I across its apo, dsRNA-bound, translocating, multimeric, and polyubiquitin-bound states. Protrusions consistent with the 2CARD appeared only transiently in the apo state, whereas a mobile 2CARD emerged upon RNA binding. During ATP-driven translocation, wild-type RIG-I moved approximately twofold slower and showed more frequent pauses and multimers than RIG-I {Delta}2CARD. Within multimers, 2CARDs formed a complex that polyubiquitin stabilized into larger, dsRNA-deforming assemblies. These findings reveal the 2CARD as a brake on the RIG-I motor, beyond signaling.
ER  -