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PreprintCC BYbioRxiv

Whole cryo-FIB lamella acquisition at high magnification with rectangular beam montage cryo-electron tomography

  1. 1Ian Holmes Imaging Centre, Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, Victoria, Australia

Abstract

The visualisation of large biological samples in cryo-electron tomography requires both few-nanometre resolution and a wide, ideally >10 micrometrre, field of view. For a single image, increasing magnification trades increased resolution for a smaller field of view. Montaging, where high-magnification images are stitched together to increase field of view, addresses the trade-off but is dose-inefficient with round beams that are standard in transmission electron microscopy (TEM), since this illumination shape does not tessellate. Our workflow greatly simplifies montaging schemes for dose-sensitive specimens, allowing large montages of any shape - from individual cells or other features of interest up to whole lamellae - to be collected at high resolution without compromising electron dose efficiency. We demonstrate the workflow by acquiring montage tomograms of whole yeast (Saccharomyces cerevisiae) cells in cryo-FIB lamellae and of human neurons.

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BibTeX
@misc{brown2026whole,
  title = {{Whole cryo-FIB lamella acquisition at high magnification with rectangular beam montage cryo-electron tomography}},
  author = {H. G. Brown and S. Valimehr and D. Styczynski and M. Mudaliyar and S. S. Kundapura and M. D. Johnson and D. Ghosal and E. Hanssen},
  howpublished = {bioRxiv},
  year = {2026},
  month = sep,
  doi = {10.64898/2026.09.27.753993},
  url = {https://www.biorxiv.org/content/10.64898/2026.09.27.753993v1},
  note = {CC BY},
}
RIS
TY  - UNPB
TI  - Whole cryo-FIB lamella acquisition at high magnification with rectangular beam montage cryo-electron tomography
AU  - H. G. Brown
AU  - S. Valimehr
AU  - D. Styczynski
AU  - M. Mudaliyar
AU  - S. S. Kundapura
AU  - M. D. Johnson
AU  - D. Ghosal
AU  - E. Hanssen
PY  - 2026
DA  - 2026/09/27
PB  - bioRxiv
DO  - 10.64898/2026.09.27.753993
UR  - https://www.biorxiv.org/content/10.64898/2026.09.27.753993v1
AB  - The visualisation of large biological samples in cryo-electron tomography requires both few-nanometre resolution and a wide, ideally >10 micrometrre, field of view. For a single image, increasing magnification trades increased resolution for a smaller field of view. Montaging, where high-magnification images are stitched together to increase field of view, addresses the trade-off but is dose-inefficient with round beams that are standard in transmission electron microscopy (TEM), since this illumination shape does not tessellate. Our workflow greatly simplifies montaging schemes for dose-sensitive specimens, allowing large montages of any shape - from individual cells or other features of interest up to whole lamellae - to be collected at high resolution without compromising electron dose efficiency. We demonstrate the workflow by acquiring montage tomograms of whole yeast (Saccharomyces cerevisiae) cells in cryo-FIB lamellae and of human neurons.
ER  -