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Molecular biology & gene regulation

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6,501 studies

  1. Comments on "SpatialDG: a novel spatial domain identification method for spatially resolved transcriptomics data based on dual-graph neural network".
    Mısra Taşçı, Mehmet Gönen
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMC
  2. MAGE: an efficient algorithm for identifying Maximal Age-indexed GEne sets.
    Murat Çalış, Volkan Altuntas, Omer Kahveci +3
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  3. Leuprorelin Suppresses Angiogenesis and Malignant Progression in Endometrial Cancer via Downregulation of the ELAVL1/VEGFA Axis.
    NingNing Zhang, Fang Zhao, LiMei Tan
    Journal of biochemical and molecular toxicologyPeer-reviewedCC BY-NC-NDFull textMolecular biology & gene regulationEurope PMCPMC
  4. ADInteractome: discovering Alzheimer's disease-associated gene interactions from single-nucleus RNA-seq data through neural interaction states.
    Yifan Wu, Neha Maurya, Yuntao Yang +6
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  5. Extracellular Vesicles in Dermatology: Where Are We and What Lies Ahead?
    Ines Martic, Alessandro Paolini, Stefania Paola Bruno +12
    Experimental dermatologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  6. IsoPrism predicts isoform usage from short-read transcriptomes through structure-guided competitive allocation.
    Peiyi Yan, Jingchen Liu, Xuejian Cui +3
    Briefings in bioinformaticsPeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  7. Mechanistic Study of GSDME and CXCL10 in SUV39H1-Mediated Pyroptosis and Immune Suppression in Cervical Cancer.
    Li Zhang, Peiting Sheng, Dongge Cai +3
    Cancer medicinePeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  8. mRNA Decay Mediates Evolution and Biological Functions in Plant Gene Expression.
    Haidan Wu, Dayin Lv, Yelin Huang +1
    Plant biotechnology journalPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  9. Multi-omics survival prediction under modality incompleteness via dynamic modality graphs and product-of-experts fusion.
    Weidong Xie, Huixia Zhang, Jinzhu Yang +2
    Briefings in bioinformaticsPeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  10. A 209-Site DNA Methylation Predictor of Chronological Age Evaluated Under Empirical and Random Missingness.
    Xiangteng Zhao, Yanhong Lu, Biqing Huang +6
    Aging cellPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  11. Unravelling the Chemolithoautotrophic Metabolism of the Carboxydotrophic Knallgas Bacterium Hydrogenophaga pseudoflava.
    Simon Grieshaber, Antonia Ebert, Pauline Kehr +6
    Microbial biotechnologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  12. HiCP2GAN: a plug and play foundation model-based GAN for Hi-C enhancement.
    Samuel Olowofila, Oluwatosin Oluwadare
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  13. Inhibitory, Anticancer Efficacy and Structural Insights of a Novel Ethyl 1-Hydroxy-3-Oxo-1-Phenylisoindoline-2-Sulfonate Compound Selectively Targeting Human CA IX and CA XII Carbonic Anhydrase, Ferroptosis-Mediated Cell Death.
    Funda Keteci, Songul Bayrak, Ufuk Atmaca +3
    Cell biochemistry and functionPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  14. AxialTAD: an axial contrast architecture for TAD boundary prediction from Hi-C.
    Woo-Young Choi, Je-Keun Rhee
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  15. Circulating Plasma Adiposomes as a Partial Lipidomic Readout of Matched Subcutaneous Adipose Tissue: Implications for Interorgan Communication
    Mohamed Saad Rakab, Imaduddin Mirza, Elsayed Metwally +7
    Comprehensive physiologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMCEurope PMC
  16. Identification of cellular double-stranded RNAs in mammalian embryonic stem cells
    Katharina J. Kases, Pilar G. Marchante, Jeroen Witteveldt +4
    RNAPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPMC
  17. Improving RNA secondary structure prediction through expanded training data
    Conner J. Langeberg, Taehan Kim, Roma Nagle +5
    RNAPeer-reviewedCC BY-NC 4.0Full text3 citedMolecular biology & gene regulationPMC
  18. The moonlighting functions of SEC13 in nonsense-mediated mRNA decay and the regulation of ER stress
    Laura Monaghan, Chetan Srinath, Abigail R. Mann +4
    RNAPeer-reviewedCC BY-NC 4.0Full textMolecular biology & gene regulationPMC
  19. Blocking FOXO4 confers neuroprotection against oxidative stress and ischemia-reperfusion caused neuronal injury
    Yasin Asadi, Anand Chakroborty, Farhad Gorjipour +7
    Journal of neuropathology and experimental neurologyPeer-reviewedLicence not statedFull textMolecular biology & gene regulationPMC
  20. Molecular basis of Cyclin B1-CDK1 recruitment by MAD1
    M. Ord, N. de Martin Garrido, M. J. Winters +8
    bioRxivPreprintCC BY-NCFull textMolecular biology & gene regulationbioRxiv
  21. Characterizing nascent readthrough transcripts in human cells
    A. McShane, I. V. Narayanan, M. T. Paulsen +13
    bioRxivPreprintCC BY-NC-NDFull textMolecular biology & gene regulationbioRxiv
  22. Deciphering molecular mechanisms of synergistic growth reduction in kinase inhibitor combinations
    Eirini Tsirvouli, Henri Colyn Bwanika, Ana Martinez del Val +5
    Molecular & Cellular ProteomicsPeer-reviewedCC BY 4.03 citedMolecular biology & gene regulationCrossref
  23. Ribonucleotide Reductase Dysregulation in Cancer – Oncogenic Hijacking and Novel Therapies: Teaching an Old Dog New Tricks
    Taylor L. Brzozowski, Mary C. Vincent, Ruth A. Keri
    Journal of Biological ChemistryPeer-reviewedCC BY 4.0Molecular biology & gene regulationCrossref
  24. Enhancing cell type deconvolution in spatial transcriptomics through incorporating multiple reference panels
    Peiyao Zhao, Justin A Colacino, Ying Ma +1
    PLOS GeneticsPeer-reviewedCC BYFull textMolecular biology & gene regulationPLOSEurope PMCEurope PMCPMC
  25. HDAC inhibition drives NOX5-dependent oxidative stress and sensitizes uveal melanoma cells to SOD1 inhibition
    Smitha Antony, Ballachanda N. Devaiah, Mariam M. Konaté +9
    Journal of Biological ChemistryPeer-reviewedCC BY 4.0Molecular biology & gene regulationCrossref