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Biochemistry & molecular biology

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9,389 studies

  1. A comparative analysis of BrdU and EdU genotoxicity shows that trypanosomatids exhibit unique responses to the presence of these thymidine analogs in their DNA
    M. A. F. de Oliveira, V. L. da Silva, T. L. Teixeira +7
    bioRxivPreprintCC BY-NC-NDFull textMolecular biology & gene regulationbioRxiv
  2. Learning inhibitor interactions from protein deep mutational scanning data and deep learning models
    Z. Zou, I. Hazelwood, G. Estevam +5
    bioRxivPreprintCC BYFull textBiophysicsbioRxiv
  3. Serpin A1 Cargo Within Tumour-Derived Extracellular Vesicles Supports Pro-Tumoural Bias of Neutrophils in Cancer.
    Maksim Domnich, Ekaterina Pylaeva, Elena Siakaeva +20
    Journal of extracellular vesiclesPeer-reviewedCC BYFull text1 citedMolecular biology & gene regulationEurope PMCPMC
  4. Comments on "SpatialDG: a novel spatial domain identification method for spatially resolved transcriptomics data based on dual-graph neural network".
    Mısra Taşçı, Mehmet Gönen
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMC
  5. MAGE: an efficient algorithm for identifying Maximal Age-indexed GEne sets.
    Murat Çalış, Volkan Altuntas, Omer Kahveci +3
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  6. Leuprorelin Suppresses Angiogenesis and Malignant Progression in Endometrial Cancer via Downregulation of the ELAVL1/VEGFA Axis.
    NingNing Zhang, Fang Zhao, LiMei Tan
    Journal of biochemical and molecular toxicologyPeer-reviewedCC BY-NC-NDFull textMolecular biology & gene regulationEurope PMCPMC
  7. ADInteractome: discovering Alzheimer's disease-associated gene interactions from single-nucleus RNA-seq data through neural interaction states.
    Yifan Wu, Neha Maurya, Yuntao Yang +6
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  8. Extracellular Vesicles in Dermatology: Where Are We and What Lies Ahead?
    Ines Martic, Alessandro Paolini, Stefania Paola Bruno +12
    Experimental dermatologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  9. IsoPrism predicts isoform usage from short-read transcriptomes through structure-guided competitive allocation.
    Peiyi Yan, Jingchen Liu, Xuejian Cui +3
    Briefings in bioinformaticsPeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  10. Mechanistic Study of GSDME and CXCL10 in SUV39H1-Mediated Pyroptosis and Immune Suppression in Cervical Cancer.
    Li Zhang, Peiting Sheng, Dongge Cai +3
    Cancer medicinePeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  11. mRNA Decay Mediates Evolution and Biological Functions in Plant Gene Expression.
    Haidan Wu, Dayin Lv, Yelin Huang +1
    Plant biotechnology journalPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  12. Multi-omics survival prediction under modality incompleteness via dynamic modality graphs and product-of-experts fusion.
    Weidong Xie, Huixia Zhang, Jinzhu Yang +2
    Briefings in bioinformaticsPeer-reviewedCC BY-NCFull textMolecular biology & gene regulationEurope PMCPMC
  13. A 209-Site DNA Methylation Predictor of Chronological Age Evaluated Under Empirical and Random Missingness.
    Xiangteng Zhao, Yanhong Lu, Biqing Huang +6
    Aging cellPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  14. Unravelling the Chemolithoautotrophic Metabolism of the Carboxydotrophic Knallgas Bacterium Hydrogenophaga pseudoflava.
    Simon Grieshaber, Antonia Ebert, Pauline Kehr +6
    Microbial biotechnologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  15. HiCP2GAN: a plug and play foundation model-based GAN for Hi-C enhancement.
    Samuel Olowofila, Oluwatosin Oluwadare
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  16. Inhibitory, Anticancer Efficacy and Structural Insights of a Novel Ethyl 1-Hydroxy-3-Oxo-1-Phenylisoindoline-2-Sulfonate Compound Selectively Targeting Human CA IX and CA XII Carbonic Anhydrase, Ferroptosis-Mediated Cell Death.
    Funda Keteci, Songul Bayrak, Ufuk Atmaca +3
    Cell biochemistry and functionPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  17. AxialTAD: an axial contrast architecture for TAD boundary prediction from Hi-C.
    Woo-Young Choi, Je-Keun Rhee
    Briefings in bioinformaticsPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMC
  18. Circulating Plasma Adiposomes as a Partial Lipidomic Readout of Matched Subcutaneous Adipose Tissue: Implications for Interorgan Communication
    Mohamed Saad Rakab, Imaduddin Mirza, Elsayed Metwally +7
    Comprehensive physiologyPeer-reviewedCC BYFull textMolecular biology & gene regulationEurope PMCPMCEurope PMC
  19. Identification of cellular double-stranded RNAs in mammalian embryonic stem cells
    Katharina J. Kases, Pilar G. Marchante, Jeroen Witteveldt +4
    RNAPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPMC
  20. Improving RNA secondary structure prediction through expanded training data
    Conner J. Langeberg, Taehan Kim, Roma Nagle +5
    RNAPeer-reviewedCC BY-NC 4.0Full text3 citedMolecular biology & gene regulationPMC
  21. The moonlighting functions of SEC13 in nonsense-mediated mRNA decay and the regulation of ER stress
    Laura Monaghan, Chetan Srinath, Abigail R. Mann +4
    RNAPeer-reviewedCC BY-NC 4.0Full textMolecular biology & gene regulationPMC
  22. Blocking FOXO4 confers neuroprotection against oxidative stress and ischemia-reperfusion caused neuronal injury
    Yasin Asadi, Anand Chakroborty, Farhad Gorjipour +7
    Journal of neuropathology and experimental neurologyPeer-reviewedLicence not statedFull textMolecular biology & gene regulationPMC
  23. Molecular basis of Cyclin B1-CDK1 recruitment by MAD1
    M. Ord, N. de Martin Garrido, M. J. Winters +8
    bioRxivPreprintCC BY-NCFull textMolecular biology & gene regulationbioRxiv
  24. Characterizing nascent readthrough transcripts in human cells
    A. McShane, I. V. Narayanan, M. T. Paulsen +13
    bioRxivPreprintCC BY-NC-NDFull textMolecular biology & gene regulationbioRxiv
  25. Human senataxin uses distinct peripheral elements to unwind R-loops and act on RNA polymerase II
    M. Lanicek, K. Sedova, Z. Hasanova +2
    bioRxivPreprintCC BY-NC-NDFull textGeneral biochemistrybioRxiv