Bioinformatics & computational biology
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- Integrating Multisource Target Evidence with Machine-Learning Potency Prediction for Alzheimer's Disease Drug Discovery
- Benchmarking and integration of viral prediction tools to uncover viral dark matter across divergent low abundance metagenomes
- A Sparse Modal Representation for Dolphin Echolocation Transients
- Phase-Based Frequency Tracking and Analysis of Vocalisations in the Genus Saxicola
- Distance-AF Multimer: A Multi-Step Approach for Protein Complex Structure Modeling with User-Defined Distance Constraints
- In Silico Design and Comprehensive Evaluation of a Novel Multi-Epitope Vaccine Candidate Against Chandipura Virus
- HighFold-Lasso: Topology-Guided Prediction of Lasso Peptide Structures Using AlphaFold3
- Facilitating Valid Statistical Inference in Biomedical Image Synthesis
- Biopsy-aware phylogenetic reconstruction from longitudinal single-cell copy number profiles
- Efficient and precise discovery of LTR-retrotransposon families using HiRepEat
- Programmable design of functional RNAs through multimodal generative learning
- DUMMEST: A simpler and faster model for frameshift-aware alignment of a DNA sequence to a protein family
- Pan-cancer multi-omics analysis reveals upregulation of the POLE2 subunit of DNA polymerase epsilon and its associations with patient survival and cellular pathways beyond DNA replication
- Gamma–distributed transmission memory in a reaction–diffusion epidemic model with nonlinear incidence
- DipSkmer: Reference-free population genomics with diploid genome skims
- PMO-Dock: Benchmarking Docking, Specificity, and Generalization in Molecular Optimization
- MFG: Multi-turn Feedback Guided Molecular Optimization
- Brain Age Gap Progression in Individuals at Risk for Neurodegeneration
- STAMP as a topology-aware molecular language for fragment-level learning and editing
- An efficient and flexible generalization of transit compartment models for delayed biological processes
- Forecasting Without Full Identification: Reliability and Computational Cost in Clot-Growth Simulation
- Estimating marginal association between paired outcomes in clustered data with an application to analyzing caries and periodontal disease data from the National Health and Nutrition Examination Survey
- MINT Block: multivariate integration across independent studies to identify multi-omics signatures
- CytoRipple: Mapping Tissue Polarization through Subcellular Cytoskeleton Dynamics
- Unsupervised source separation and clustering of soundscape recordings predicts avian richness in hyperdiverse systems