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Systems & synthetic biology

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1,514 studies

  1. Integrating Narrow-Window DIA with AI-Powered Search Enables Deep and Reliable Functional Proteomics
    Y. Xiong, D. Stepec, H. Zhang +6
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  2. Stable epigenetic states set single-cell activation thresholds in mammalian expression systems
    E. J. Costa, C. Rios-Martinez, C. J. Andrews +2
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  3. Cell Surface Sialoglycan Engineering Through Exogenous mRNA
    V. Affe, Q. Shi, O. Mann-Delany +3
    bioRxivPreprintCC BY-NDFull textSystems & synthetic biologybioRxiv
  4. Thermoresponsive, Shear-Thinning Supramolecular Hydrogels from Peptide-Polymer Conjugates for Bioinspired 3D Cell Culture
    B. M. Huntington, J. A. Dresel, M. Schweitzer +3
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  5. Arrayed hydrogels pair whole-cell imaging with single-cell mass spectrometry proteomics
    M. Overton, C. Deroy, E. Wang +4
    bioRxivPreprintCC BYFull text1 citedSystems & synthetic biologybioRxiv
  6. Multidimensional T1-T2 Relaxation Imaging In Vivo on a Portable 0.064~T MRI Scanner
    E. Wilczynski, K. Najmudeen Magdoom, A. V. Avram +4
    bioRxivPreprintCC0Full textSystems & synthetic biologybioRxiv
  7. Net conversion calculations of catabolic pathways
    F. Bruggeman, M. Remeijer, C. Odendaal +1
    bioRxivPreprintCC BY-NC-NDFull text1 citedSystems & synthetic biologybioRxiv
  8. A signaling network motif couples protein expression levels and intracellular localization
    D. Mazo-Duran, A. Juarez-Leardini, R. Torrillas +6
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  9. De Novo Design and AlphaFold3 Evaluation of Protein Binders Targeting Specific Sites of MAP4K4
    A. Jain, A. V. Tobias
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  10. Electrical Stunning does not affect Brain Tissue Integrity and Stress Response in Larval Zebrafish
    D.-S. Burkhardt, K. Schultz, M. Glaser +5
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  11. Layered mixed matrices and reaction networks
    Arne Kuhrs, Máté L. Telek, Nicola Vassena
    arXivPreprintCC BY 4.0Full textSystems & synthetic biologyarXiv
  12. Quantum Optimisation for Protein-Protein Interaction Network Alignment
    Merle Stahl, Robert J. Banks, Matthias Traube +4
    arXivPreprintarXiv licenceFull textSystems & synthetic biologyarXiv
  13. Omega-N: Interpretable Structural Node Descriptors and Their Applicability Domain
    Alberto Acedo
    arXivPreprintCC BY-NC-ND 4.0Full textSystems & synthetic biologyarXiv
  14. Democratizing Agentic Access to Bioinformatics and Biopharmaceutical Databases and Analyses with BioMCP-TS
    Y. Yuan
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv
  15. Cytoskeletal disassembly by optogenetic control of RhoA signaling termination
    E. E. Berlew, J. Barakat, P. Camacho Sierra +1
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv
  16. Human knee osteoarthritis patient-specific cartilage-on-a-chip model captures donor differences to stressors and treatments
    L. Banh, K. Perera, B. R. Lobo +9
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  17. Patient-Derived Organoids as a Model to Understand Tumor Microenvironment-Driven Nano-Bio Interactions - A Framework Towards Improved Nanomedicine Translation
    M. P. Resmi, J. Chakrabarti, K. Pond +1
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  18. Analytical and functional clearance of dsRNA contaminants from in vitro transcribed mRNA by an engineered dsRNA-binding protein
    T. Vonderfecht, P. Lam, G. Verovskaya +1
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  19. Simulations predict that alterations in balance control contribute to the higher cost of walking with a prosthesis
    W. Muijres, M. Afschrift, R. Ronsse +2
    bioRxivPreprintCC BYFull textSystems & synthetic biologybioRxiv
  20. Tube-in-tube oxygen saturator enabling precise and dynamic control of liquid-phase oxygen concentrations for human cell culture applications
    M. Biermann, U. A. Nuber, B. J. M. Etzold
    bioRxivPreprintAll rights reservedFull textSystems & synthetic biologybioRxiv
  21. Divergent nitrogen transition pathways during global agricultural development
    A. Bozal-Leorri, M. Corrochano-Monsalve
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  22. Spatial-filtering nanoscopy for 40-nm label-free Raman imaging
    J. Li, B. Lamu, Y. Fenng +4
    bioRxivPreprintCC BY-NCFull textSystems & synthetic biologybioRxiv
  23. Division-resolved inference of flow and trajectories in proliferating cell populations
    J. h. Kang, G. Shin, T. Miettinen
    bioRxivPreprintCC BY-NC-NDFull textSystems & synthetic biologybioRxiv
  24. Sequence-free landscape inference for directed evolution
    Sebastian Towers, Jessica James, Harrison Steel +1
    PLOS Computational BiologyPeer-reviewedCC BY 4.0Full textEvolutionary biologyGenetics & genomicsSystems & synthetic biologyPLOS
  25. Lighthouse-shaped rapid identification device for acidic electrolyzed oxidizing water: A low-cost detection method based on conductivity differences
    Yuan Mao, Wei Zheng, Qian Chen
    PLOS OnePeer-reviewedCC BY 4.0Systems & synthetic biologyPLOS