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Molecular biology & gene regulation

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6,503 studies

  1. PLANTMETBENCH: A MULTIMODAL KNOWLEDGE GRAPH BENCHMARK FOR BIOSYNTHESIS PREDICTION
    Elena Del Pup, Berfin Inal, Joana Tirana +6
    ChemRxivPreprintCC BYFull textMolecular biology & gene regulationChemRxiv
  2. Steric Protection of Phosphodiester Linkages by 5′-Geminal Substitution Enables Site-Selective Phosphorothioate Reduction in Gapmer-Type Antisense Oligonucleotides
    Takao Yamaguchi, Takaki Habuchi, Takaya Sugiura +11
    ChemRxivPreprintCC BYFull textMolecular biology & gene regulationChemRxiv
  3. Direct molecular formula prediction from tandem mass spectra with a multi-task-trained encoder and deterministic stoichiometric correction
    Shang Zhang, Zhenlin Dong, Ming Gao
    ChemRxivPreprintCC BY-NCFull textMolecular biology & gene regulationChemRxiv
  4. Direct large-volume injection with liquid chromatography/high-resolution mass spectrometry for screening of bacterial growth substrates in tap water
    Yutaro Uehara, Ikuro Kasuga, Futoshi Kurisu
    ChemRxivPreprintCC BY-NC-NDFull textMolecular biology & gene regulationChemRxiv
  5. Hydrophobic Interaction Chromatography Framework for Drug-to-Antibody Ratio Assessment of a High DAR Cysteine-Linked ADC
    Rodell C. Barrientos, Wei Lin, Meghan O’Leary DaSilva +10
    ChemRxivPreprintCC BYFull textMolecular biology & gene regulationChemRxiv
  6. CDH1 loss remodels gene expression and lineage identity in human mammary epithelial cells
    Maggie Musick, Chinasa A. Ufondu, Carmen E. Rowland +12
    PLOS GeneticsPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  7. An extensible deep learning framework for multi-type chromatin interaction prediction through hierarchical adaptation strategies
    Shuaibin Wang, Tong Chen, Weixu Liu +4
    PLOS Computational BiologyPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  8. MARK3 promotes host antiviral defense by driving GEF-H1–mediated TBK1 activation
    Xingmei Qi, Xue Zhu, Wenbiao Peng +15
    PLOS PathogensPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  9. Aberrant mRNA 5-methylcytosine modification contributes to ovarian dysfunction in a rat model of polycystic ovary syndrome
    Xiaohong Chen, Jing Lin, Zhoulin Chi +2
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  10. Eight quick tips for using the reactome knowledgebase
    Nancy T. Li, Marija Milacic, Karen Rothfels +1
    PLOS Computational BiologyPeer-reviewedCC BY 4.0Full textEnzymology & metabolismMolecular biology & gene regulationProteomics & metabolomicsPLOSPMC
  11. Mosaic divergent repeat interruptions of motif length and sequence, mDRILS, of XDP-linked repeats affect formation of DNA/RNA triplexes & quadruplexes
    Niousha Sharifi Soltani, Bita Zamiri, Amirreza Shafieeha +7
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  12. Cross-platform comparison of diabetic foot ulcer transcriptomes identifies partially concordant disease-associated signals
    Shiqin Huang, Yukun Li
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  13. Environmental modulation of methyl farnesoate release in two clones of Daphnia pulex differing in the sensitivity to exogenous stimuli
    Nicolo’ Bellin, Nicolo’ Riboni, Annamaria Buschini +7
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  14. Evolutionary and dynamic constraints converge on a conserved coupling sector in thermally adapted GH1 β-glucosidases
    Li-Ting Zheng, Yi Li, Xian He +5
    PLOS Computational BiologyPeer-reviewedCC BY 4.0Full textEnzymology & metabolismMolecular biology & gene regulationPLOSPMC
  15. Divergence of cortical force-generating mechanisms underlies differences in spindle behavior between C. elegans and C. inopinata
    Shun Oomura, Koji Kyoda, Shuichi Onami +2
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  16. The peculiar properties of pericentromeric regions of genomes and their influence on sex chromosome evolution
    Deborah Charlesworth
    PLOS GeneticsPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  17. From first contact to challenge: Lung immune modulation by single-sex Schistosoma mansoni infections
    Miriam Bischofsberger, Tim A. Dannenhaus, Sanja U. Schönberger +3
    PLOS Neglected Tropical DiseasesPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  18. Oxidative stress-driven cellular heterogeneity in Knee Osteoarthritis: scRNA-seq pinpoints SPP1 and CYBA for diagnostic development
    Yijiang Liu, Yiman Chi, Jiefeng Yin +1
    PLOS OnePeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  19. Structural basis for inhibition of the lipid flippase MurJ by phage lysis protein SglPP7 suggests convergent evolution with other Sgl peptides
    Kaito Hosoda, Hidetaka Kohga, Sixian Wu +5
    PLOS BiologyPeer-reviewedCC BY 4.0Full textMolecular biology & gene regulationPLOSPMC
  20. Mechanistic insights into ENO2-driven glycolysis and tumor progression in hepatocellular carcinoma
    Yan Liu, Xiao-Ran Zhang, Li Dai +5
    PLOS OnePeer-reviewedCC BY 4.0Full textEnzymology & metabolismMolecular biology & gene regulationPLOSPMC
  21. Microbes and TNF drive colitis in the absence of innate lymphoid cells
    Alvaro Torres-Huerta, Arpitha Mysore Rajashekara, Lauren C. Mayer +9
    iSciencePeer-reviewedCC BY-NC-ND 4.0Full textMolecular biology & gene regulationCell PressCrossrefPMC
  22. Integrated multi-omics analysis of flavonoid metabolism in soybean seeds of different colours reveals candidate regulatory networks associated with anthocyanin and isoflavone accumulation
    Yan Qin, Wenjie Chen, Yuan Chen +10
    Food Chemistry: Molecular SciencesPeer-reviewedCC BY-NC 4.0Full textMolecular biology & gene regulationPMC
  23. Equity dimensions of future vulnerabilities to climate hazards: Long-term spatial population projections for New York City consistent with Shared Socioeconomic Pathways
    Deborah Balk, Jenna F. Tipaldo, Leiwen Jiang +1
    Proceedings of the National Academy of Sciences of the United States of AmericaPeer-reviewedCC BY-NC-ND 4.0Full text1 citedMolecular biology & gene regulationPMC
  24. In vitro binding energies capture Klf4 occupancy across the human genome
    Anne Schwager, Jonas Neipel, Yahor Savich +4
    Proceedings of the National Academy of Sciences of the United States of AmericaPeer-reviewedCC BY-NC-ND 4.0Full textMolecular biology & gene regulationPMC
  25. Heterogeneous impacts of temperature extremes on climate attitudes and Green voting
    Jacopo Bassetto, Roman Hoffmann, Raya Muttarak +2
    Proceedings of the National Academy of Sciences of the United States of AmericaPeer-reviewedCC BY-NC-ND 4.0Full textMolecular biology & gene regulationPMC